Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq20354 82.4 9e-11 >seq20354 Length=4240 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 65011 CCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCC 65070 || || ||| ||| ||| || | |||||| |||| ||| | | || | | ||| | Sbjct 1349 CCCTGCATTAAGAGGAAAGCAGACTGGGCACTGAACTGGATCGGCA-ACCGGAGCGCCAC 1407 Query 65071 -TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATT 65129 || | ||||||| | | ||||||||| || ||||| ||||||||||| || || || Sbjct 1408 ATTTGGCGAGCGCATCGTCGCGTTTGCGGCCGTCGAGGGCATCTTCTTCTCGGGATCGTT 1467 Query 65130 CTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 |||| | || | ||| ||||||||||||| |||||||| ||||| Sbjct 1468 -TGCGTCCATCTTCTGGCTGAAGAAGCGGGGACTCATGCCCGGCCT 1512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595044499646080