Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq165983 95.1 1e-14 seq130173 86.0 7e-12 >seq165983 Length=1484 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 148130 ACGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189 ||||||||| || |||||||||| || ||||||||||||||| |||||||||||||| Sbjct 661 ACGGGGTGTGGCGCAGCTTGGTAGCGCATCCGCTTTGGGAGCGGAGGGTCGCAGGTTCAA 602 Query 148190 ATCCTGCCACCCCGA 148204 |||||| |||||||| Sbjct 601 ATCCTGTCACCCCGA 587 >seq130173 Length=1924 Score = 86.0 bits (94), Expect = 7e-12 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 148131 CGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAA 148190 |||| ||| ||| ||||||||||||||| || ||||||| || |||||||||||||| || Sbjct 1283 CGGGATGTGGCTCAGCTTGGTAGAGCGCTCGGTTTGGGACCGAGAGGTCGCAGGTTCGAA 1342 Query 148191 TCCTGCCACCCCGA--TTTATCAAAA 148214 ||||| | ||||| |||| |||| Sbjct 1343 TCCTGTCTTCCCGACCATTATTAAAA 1368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548217317815520