Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq31268 167 2e-36 >seq31268 Length=3617 Score = 167 bits (184), Expect = 2e-36 Identities = 264/374 (71%), Gaps = 6/374 (2%) Strand=Plus/Minus Query 34200 TGCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTG 34259 || ||||||||| || || ||||||||||||||||| || | || || |||||| Sbjct 3284 TGGCGGCGGGTTCTTGAGGATGAAGGTGTTGAGCTTGTGGGCCCCGTCGAGGGTGCCGCT 3225 Query 34260 ATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTA-GC-GGA-CACGATGAG 34316 | ||||| || ||| || | | ||| | || || ||| ||| ||| Sbjct 3224 GTGGCCGCACGCCCGGCA---CTTGGTGGTGATGAGCCCCTTGCGCTGGAGCACCCCGAG 3168 Query 34317 CTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAG 34376 | | ||||| |||||||| || | |||| ||| | ||||||||| || || || Sbjct 3167 CACCGTCTCGGGGTTGTCGCACGAGGCGCACAGCACGTAGCGGCGGATGAAGCCGTCCAG 3108 Query 34377 CAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTA 34436 | |||||| | ||| | | ||||| | |||||||||||| | || ||||| ||| Sbjct 3107 GATGTCCTGCAGCTTGGCCGCCTCGTGAGCCCCGTTGACGATGTAGCGGTCGTTCTTGGC 3048 Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 || | |||||| || || ||||||||||| || |||||||| |||||||| ||||||| Sbjct 3047 GTCCAGCTGCGTCTGGGCCCCCAGCTCGCAACCAAAGTACTTGGTCGGGTAGGTGGCCGG 2988 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 || || |||||||| | || ||||||||| | || ||||||||||||||||| Sbjct 2987 CCGGTTCAGGGCCTTGGCCACCTCCCCCATGTTGACCAGCACCGTCTTGATGCCGTTGCC 2928 Query 34557 CTTTCCTTCGACCT 34570 ||| || || |||| Sbjct 2927 CTTGCCCTCCACCT 2914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411812576314388