Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq5422 113 2e-20 >seq5422 Length=1306 Score = 113 bits (124), Expect = 2e-20 Identities = 268/403 (67%), Gaps = 19/403 (5%) Strand=Plus/Minus Query 44535 GTCATGTCCGATGTGCAGGCCATCTCCAAGGACTCCCGCAACGAGCAGCAGCACTTCAAC 44594 |||||| ||| || |||| |||| ||||| |||||||| |||||| ||| Sbjct 935 GTCATGGACGAGGTACAGGGCATCGCCAAGCGTGACCGCAACGCCCAGCAGGGGTTCGTG 876 Query 44595 TTCCGCGGCATCGACGCCGTCATGAACGTGGTGGGACCGGCGCTGCGCGCGCACGGCGTC 44654 |||||||||||||||||| |||||| || || || || ||||| |||||| ||| Sbjct 875 TTCCGCGGCATCGACGCCACGATGAACACCGTCGGCCCCGCCCTGCGAAAGCACGGTGTC 816 Query 44655 ACGGTCATCCCGCGCGCC--GTCGAGGAATACTCGGAGCGCTACGAGACGCAGCCCCGCG 44712 ||||||| |||| ||||| | ||| ||||| ||| ||||| Sbjct 815 GTCATCATCCCCGACGCCATGTCGATCGA--CTCCGAGCGGTACCAGACG---------- 768 Query 44713 GCAACCGCCCCGGCACCCCGATGATCAACCGCCTTGTTCGGGTGGAGTTCACCGTCTTCG 44772 || | | | |||| ||||| ||| | || | || | |||||| | || Sbjct 767 GCTAAGGGCG-GGCA----GATGAAGAACGCCACCGTCCACATGCGCTACACCGTTTACG 713 Query 44773 GGCCTCGCGGCGACTGGTTCGCTGGCACTACCTACGGTGAGGCCGCCGACTCGGGCGACA 44832 | || || ||| | ||| | || || ||||| || || || ||| | ||||||| Sbjct 712 GCCCGGAGGGTGACAGCTTCACCGGATGCACGTACGGGGAAGCAGCGGACGCTGGCGACA 653 Query 44833 AGGCGATGTCCAAGGCTCACAGCGTGGCCTACCGGACATTCCTGTTGCAGGCTCTGACCA 44892 ||||| | ||||| || ||| || ||||| || |||||| |||||| ||||| Sbjct 652 AGGCGGTCAGTAAGGCGCAGTCCGTCGCGTACCGCACGTTCCTGCTGCAGGGACTGACGG 593 Query 44893 TCCCCACCGACGAGCCCGACCCCGACGAGGATGCGCACGAGCG 44935 | || || | |||| ||||||||||| ||| |||||||||| Sbjct 592 TGCCGACGCAGGAGCGCGACCCCGACGCGGACTCGCACGAGCG 550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236755602906796