Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq112114 113 3e-20 >seq112114 Length=2115 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| |||| ||||| ||||| ||||| || ||||| || |||| Sbjct 1978 CCACCGCGCAGACGCAGGACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAC 1919 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || |||||||| ||||| || | || | | ||||||||||| ||| Sbjct 1918 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 1859 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | ||| ||||| |||| | ||||| | || || Sbjct 1858 ATCCCTTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCGATGGTGTCGCTCGGCTCAACC 1799 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || |||||||| | ||| || || || |||||||| Sbjct 1798 TCGAGCGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384259026216756