Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq112114 87.8 2e-12 >seq112114 Length=2115 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| || | |||| || | || | || || || || || |||||||| ||| Sbjct 1751 GCCTCCGCGCAGCCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1692 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| |||||||| || || || || |||||||||||||||| ||||| || Sbjct 1691 CAAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCGG 1632 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || || || ||||| ||| || || | | ||| | |||||| | || || || Sbjct 1631 GATCCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTTTCAATCGTGTCGCTCGGCTCCAC 1572 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || || ||||||| ||||| ||||| || ||||| Sbjct 1571 CTCGAGCGTGATGGTTTTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 1524 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 137276 CATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTA 137335 || |||||||||| |||||||||||||| || ||||| ||||| |||||| || | Sbjct 2115 CAAAGATCAGACGCTGCTGATCGGGAGGAATACCTTCCTTGTCCTGAATTTTCGCCTTCA 2056 Query 137336 GCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTT 137395 | || | |||||| |||| || || || | || | ||||||||||| | |||| Sbjct 2055 CGTTCTCGATCGTGTCACTGGGCTCCACCTCCAGTGTGATTGTCTTGCCGGTGAGGGTTT 1996 Query 137396 TTACGAATATTTGCAT 137411 | ||||| || ||||| Sbjct 1995 TGACGAAGATCTGCAT 1980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487295061691200