Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_023701.1 Length=69864 Score E Sequences producing significant alignments: (Bits) Value seq70437 114 6e-21 seq133315 95.1 5e-15 >seq70437 Length=1356 Score = 114 bits (126), Expect = 6e-21 Identities = 197/283 (70%), Gaps = 11/283 (4%) Strand=Plus/Minus Query 9775 CCGCACCTTCACCGACAGCGTGATCGCGCTGCTGGGCGTGTCGACCTCCGACGACCGGAT 9834 ||| || ||||||||| | |||| || || ||| || ||| ||||| || || Sbjct 456 CCGGACGTTCACCGACGCCACCGTCGCACTACTCGGCACCTCCACCGACGACGGGCGCAT 397 Query 9835 GATCGCCAAGGACGTCGAACTCAGCTTCCGCTCGTTCCCTCACCCGCTCATGTGGATGAA 9894 | |||| |||| |||| ||| ||||||| ||||| | ||||| |||||| |||| Sbjct 396 GCTCGCATCGGACATCGACGTCACCTTCCGCAGCTTCCCCCTGCCGCTGATGTGGGTGAA 337 Query 9895 GCAGACCGGCTCCGGCTACGGCGGGCACACCGAGGCCTTCACCGTCGGCGCGATCGAGTC 9954 ||||||||||| ||| ||| ||| | |||| ||| ||||||| ||||| | Sbjct 336 GCAGACCGGCTTCGGACACG------ACA---ACGCCTACACGGTCGGCGTCATCGAAGC 286 Query 9955 GGCCCGTATCGACGGCGACAAGGTGTACGGCTCCGGCTACCTGCTGAACACGCCCGAGGC 10014 || ||| ||||||||||| | || ||||| || ||||| |||||| |||||| Sbjct 285 CGCACGTGTCGACGGCGACGCCATCCTCGCGTCCGGTTATCTGCTCAACACGGACGAGGC 226 Query 10015 CGATGAGGCGGCGGGCGAGCT-GAGCCACAAGGTCACCGCGCC 10056 | ||||| || | | || | ||| ||| ||||||| ||| Sbjct 225 GAACGAGGCTGCCGACCAGATCGAG-CACGGCGTCACCGGGCC 184 >seq133315 Length=1321 Score = 95.1 bits (104), Expect = 5e-15 Identities = 262/402 (65%), Gaps = 21/402 (5%) Strand=Plus/Minus Query 16692 GCAGGACAACGCCGAGGGCAAGGAATGCGTCTCTGATCGCACCGCGCCCGAGCGTCGCTG 16751 |||||| ||||| |||| ||| ||| || | || |||||| |||||||||| || Sbjct 868 GCAGGAGAACGCGCAGGGACAGGTGTGCATCACCGACCGCACCCCGCCCGAGCGCAAGTG 809 Query 16752 GTACACCCCGGCGCTGGAACTCTGCAACGTCAACCCCGGCCTGATCACGATGTTCACCGG 16811 |||| || | ||||| || ||| || ||| ||| |||||||| ||| ||| || Sbjct 808 GTACGACCTCGAGCTGGCCCTGTGCGGGGTGAACTCCGAGCTGATCACCATGCTCAACGC 749 Query 16812 CTGGGAAAACCTGCTGGACGCGGACGATGAGGTCA------TCGGTTTCCGCGACCAGAA 16865 ||| | || ||| | ||| | ||| | |||| |||||||||||||| Sbjct 748 GTGGAA------GCAGGAAGTCGACTACAAGGGCGACTCGGTCGGCTTCCGCGACCAGAA 695 Query 16866 GGAGATCGAGAGTGACTACGGCATTGCCCTTGAGGTCTGGACCTCGGGCAAGTCGGAGGA 16925 | |||| |||||||| | ||||| || |||||||| |||||| | || || Sbjct 694 GCGCGTCGAATCGGACTACGGTGTGGCCCTGGAAATCTGGACCGGCGGCAAGGCCGACGA 635 Query 16926 CGACTGCGGCGAGATTCCGACGACCGACGCGGCGCTGCTCGACACCAGC---TCGGGCCG 16982 ||| ||| | | | |||| || | | ||| ||| ||| || ||| Sbjct 634 CGATTGCCCC------ACCCCCACCGGCGACGATATTTTCGCCACGAGCACGTCCGGCAA 581 Query 16983 CAAGTACGGGTACTTCCTGTTCGCGGGCACCGAGTGGACGCTGGGCGACATCACGATCGG 17042 ||||| |||||| | ||| ||||||||||| ||||| |||||||| | | Sbjct 580 AAAGTATGGGTACCTGCTGACGTGGGGCACCGAGTTCACGCTCGGCGACATTGAGGTACA 521 Query 17043 CGCGACCGTCGCGACCCTGACCCTGACGGGCCGGACCATCGC 17084 ||| |||||| | | | ||||| ||||| | |||||| Sbjct 520 GGCGGACGTCGCCAACTTCACCCTCTCGGGCATCAGCATCGC 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 222883067141700