Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq120763 86.0 8e-12 >seq120763 Length=5676 Score = 86.0 bits (94), Expect = 8e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 8668 TATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACGAGG 8727 ||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||||| || Sbjct 4419 TATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGG 4478 Query 8728 AG 8729 || Sbjct 4479 AG 4480 Score = 82.4 bits (90), Expect = 1e-10 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 11740 TATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACGAGG 11798 ||||||||| ||||| |||| ||||| | |||||||||||||||||||||||||||| || Sbjct 4419 TATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGG 4478 Query 11799 AG 11800 || Sbjct 4479 AG 4480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 651175834911040