Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq106069 111 6e-20 >seq106069 Length=1164 Score = 111 bits (122), Expect = 6e-20 Identities = 216/313 (69%), Gaps = 12/313 (4%) Strand=Plus/Minus Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCACCACGGACTGC---GCCTGC 36769 ||||||| || || ||||| ||||||| |||||| || ||| || | | ||| | Sbjct 345 TCGGCCCGGCCGGAACCGGCAAGACCTACCTGGCGATGG-CCATGGCCGTCAATGCC--C 289 Query 36770 TGGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGA 36829 | || ||| || || ||| || || |||| || ||||||||||| |||| ||| Sbjct 288 TCCAGCACAAAGAGGTCTCGCGGATCATCCTCACCCGACCCGCCGTCGAAGCCGGGGAAT 229 Query 36830 AGCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGC 36889 || ||||||||||| ||| | || | || ||||| | ||||| || |||| | Sbjct 228 CCCTGGGCTACCTGCCGGGCACCCTCAACGACAAGATCGACCCGTATGTGCGCCCGCTCT 169 Query 36890 TGGACGCGGTGATCGACCTGGTTG-GCCCGA--CGATGGCCAAGCGCCTGCAGGAGACCC 36946 ||||| || |||| |||| | ||||| |||| | || || |||||| Sbjct 168 ACGACGCCCTGCACGACATGGTCGACCCCGAATCGAT---CCCGCTGCTCATCGAGACCG 112 Query 36947 GCCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTTCC 37006 || | ||||| |||| || ||||||| ||||| ||||| ||| |||||||| | ||| Sbjct 111 GCACGATCGAGGTCGCTCCCTTGGCCTATATGCGCGGCCGGACCCTCAACGACGCCTTCA 52 Query 37007 TCATCGCCGACGA 37019 ||||| |||||| Sbjct 51 TCATCCTCGACGA 39 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180357711919608