Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq112114 120 3e-22 >seq112114 Length=2115 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||||||||||| ||||| |||| || | || || || || || || ||||||||| Sbjct 1752 TGCCTCCGCGCAGCCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 1693 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | |||| | ||||||||||| || |||||| | || ||||| || || || |||| Sbjct 1692 ACAAGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCG 1633 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| |||| | |||| | ||||| | | || | Sbjct 1632 GGATCCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTTTCAATCGTGTCGCTCGGCTCCA 1573 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||| || ||||| ||||| || ||||| ||||| Sbjct 1572 CCTCGAGCGTGATGGTTTTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 1524 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||||| |||| |||| || | || || ||||| || || |||||||| Sbjct 1980 TGCCACCGCGCAGACGCAGGACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCG 1921 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | |||| |||| ||||| || || |||||| | ||||||||||| |||||||| | Sbjct 1920 ACAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGG 1861 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||| ||| || | | |||| | ||||| | | |||| Sbjct 1860 GAATCCCTTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCGATGGTGTCGCTCGGCTCAA 1801 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||||| || || || || || ||||| ||||| Sbjct 1800 CCTCGAGCGTGATCGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423875234541792