Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq112114 91.5 9e-14 >seq112114 Length=2115 Score = 91.5 bits (100), Expect = 9e-14 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| |||| ||||| ||| |||||| || ||||| || || || | || || Sbjct 1741 AGCCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGG 1682 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || || ||||| || || | ||| || ||||| ||||| | |||||| Sbjct 1681 CCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATCCCCTCC 1622 Query 34609 TTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTC-TTCGCTCTCCACTTCCACGG 34666 ||||| ||| || | || ||| | ||| ||||| ||| |||||| || | | Sbjct 1621 TTGTC-CTGAATCTTGGCCTTCACGTTTTCAATCGTGTCGCTCG-GCTCCACCTCGAGCG 1564 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || ||||| ||||| | ||||| || || ||||||||| Sbjct 1563 TGATGGTTTTCCCGGTCAGGGTTTTGACGAAGATCTGCATG 1523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313945124276228