Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_028742.1 Length=70270 Score E Sequences producing significant alignments: (Bits) Value seq70437 95.1 5e-15 >seq70437 Length=1356 Score = 95.1 bits (104), Expect = 5e-15 Identities = 221/333 (66%), Gaps = 9/333 (3%) Strand=Plus/Minus Query 9781 CCGCACCTTCACCGACGCGGTGATTGCGCTGTTGGGCGTGTCGACCTCCGACGACCGGAT 9840 ||| || ||||||||||| | || || | ||| || ||| ||||| || || Sbjct 456 CCGGACGTTCACCGACGCCACCGTCGCACTACTCGGCACCTCCACCGACGACGGGCGCAT 397 Query 9841 GATCGCCACGGACGCTGAGTTGTCCTACCGGTCGTTCCCGCACCCGCTCATGTGGATGAA 9900 | |||| ||||| || | ||| ||| ||||| | ||||| |||||| |||| Sbjct 396 GCTCGCATCGGACATCGACGTCACCTTCCGCAGCTTCCCCCTGCCGCTGATGTGGGTGAA 337 Query 9901 GCAGACCGGCTCCGGCTACGGCGGGCACACCGAGGCCTTCACCGTCGGCGCGATCGAGTC 9960 ||||||||||| ||| ||| ||| || ||| ||| ||||||| ||||| | Sbjct 336 GCAGACCGGCTTCGGACACG------ACAACG---CCTACACGGTCGGCGTCATCGAAGC 286 Query 9961 GGCCCGCGTCGAGGGCGACAAGGTGTACGGCTCCGGCTACCTGCTCAACACGCCCGAGGC 10020 || || ||||| |||||| | || ||||| || |||||||||||| |||||| Sbjct 285 CGCACGTGTCGACGGCGACGCCATCCTCGCGTCCGGTTATCTGCTCAACACGGACGAGGC 226 Query 10021 CGATGAGGCGGCGGGCGAACTGGCGCACAAGGTCACCGCGCCGTCGGTCGACCTCGCTCA 10080 | ||||| || | | | | | |||| ||||||| ||| ||||| | | | Sbjct 225 GAACGAGGCTGCCGACCAGATCGAGCACGGCGTCACCGGGCCCAGTGTCGATTTGGGTGC 166 Query 10081 GACCGAGTGGAAGCTGACCAACGAGGACGGCGA 10113 | ||||||| | || ||||| ||||||| Sbjct 165 GGTCGAGTGGGTGACCGCCGACGAGAACGGCGA 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 224179028835356