Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_029068.1 Length=31703 Score E Sequences producing significant alignments: (Bits) Value seq35608 105 1e-18 >seq35608 Length=1089 Score = 105 bits (116), Expect = 1e-18 Identities = 198/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 21615 CGTTCCGGCCGACTACACCAGCGCGTTGAAGGCGGCGAAGACTTATTCAGACACCATGCA 21674 |||||| ||||| ||| || ||| ||| | ||| |||| ||||| |||| ||||| Sbjct 792 CGTTCCCGCCGAATACTCCTCCGCCCTGACGAAGGCCGAGACCTATTCGGACATGATGCA 851 Query 21675 CATGAGTAAGCGGGGGATTTATGACCAACTTACTTCCGACGCCGGCGATAAATTCTCACC 21734 |||||| |||| ||| || || || || || || ||| ||| || | ||||| | Sbjct 852 CATGAGCAAGCAGGGCATCTACGATCAGCTGACCAGCGAATACGGTGAGGACTTCTCGGC 911 Query 21735 GGAAGCGGCGCAATATGCAGTAGACCACGTCAACGCTAACTGGTACCAAAACGCTTTAAA 21794 || || || || || || | ||| ||||| | || ||||| | |||| || | | Sbjct 912 CGAGGCCGCTCAGTACGCCATCGACAACGTCCAGGCCGACTGGAATGAAAATGCACTGGA 971 Query 21795 GGCGGCGAAGAGTTACCAAGACGATATGGCAATGTCACCCGACGCAATCAGAGACCAACT 21854 | ||| || ||||| ||||||||||| ||||| ||| |||| ||| || || || Sbjct 972 GAAGGCTCGGACCTACCAGGACGATATGGCCATGTCGCCCAACGCCATCCACGATCAGCT 1031 Query 21855 CACTTCCGACGCCGGTGACAAGTTTACCCCGGAAGAAGCGGACTACGCTAT 21905 ||| ||| ||| || |||| ||| | | | || |||||||| || Sbjct 1032 CACGAGCGAGTACGGCGAGCAGTTCACCACCTCACAGGCCGACTACGCGAT 1082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101081912032680