Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq112114 181 2e-40 >seq112114 Length=2115 Score = 181 bits (200), Expect = 2e-40 Identities = 170/215 (79%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| ||||||||||| |||||||| || |||| ||||| | || || Sbjct 1963 AGGACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCC 1904 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || || || || || |||| |||||||||||| Sbjct 1903 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATCCCTTCCTTGTCC 1844 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 ||||| || || ||||||||||||||||| ||| ||||||||||| |||||| Sbjct 1843 TGGATTTTGGCCTTGACGTTTTCGATGGTGTC---GCTCGGCTCAACCTCGAGCGTGATC 1787 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| ||||| || || | |||||| Sbjct 1786 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1752 Score = 150 bits (166), Expect = 4e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || | | ||| | |||||| Sbjct 1735 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCT 1676 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || || | || ||||||||| Sbjct 1675 TCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 1616 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 || ||||| ||||||||||| || ||||| ||| || |||||||| ||||| Sbjct 1615 TGAATCTTGGCCTTCACGTTTTCAATCGTGTC---GCTCGGCTCCACCTCGAGCGTGATG 1559 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || || || || | |||||| Sbjct 1558 GTTTTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 1524 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 210981 AAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACG 211040 ||||| || || || || || ||||||| |||||||||||||| || || |||||| Sbjct 2113 AAGATCAGACGCTGCTGATCGGGAGGAATACCTTCCTTGTCCTGAATTTTCGCCTTCACG 2054 Query 211041 TTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTT 211100 || ||||| |||||| | || ||||| || ||||| ||||| || ||||| || || Sbjct 2053 TTCTCGATCGTGTCACTGGGCTCCACCTCCAGTGTGATTGTCTTGCCGGTGAGGGTTTTG 1994 Query 211101 ACAAACACCTGCAT 211114 || || | |||||| Sbjct 1993 ACGAAGATCTGCAT 1980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156114603016340