Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq112114 116 2e-21 >seq112114 Length=2115 Score = 116 bits (128), Expect = 2e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || |||||||| ||||| ||||| | | Sbjct 1752 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACGATCACGCTCGAGGTTGAGCCGAGC 1811 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| | || ||||| ||||| ||||| | || || ||||| Sbjct 1812 GACACCATCGAAAACGTCAAGGCCAAAATCCAGGACAAGGAAGGGATTCCCCCGGATCAG 1871 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || |||||||| ||||| || |||| ||||| | || |||||| Sbjct 1872 CAGCGTCTCATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTGTCGGACTACAAC 1931 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 1932 ATCCAGAAAGAGTCCAC 1948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337167097974128