Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq55823 95.1 1e-14 >seq55823 Length=3224 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 29654 TCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCT 29713 |||||||||| || |||| ||| || || |||||||| || ||||| || || ||| Sbjct 1946 TCCACGTGGTTGAGATAGATGTGGGCGTCCCCCAGGGTATGTACAAAGTCCCCGGGTCGC 1887 Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 |||||| || | |||| ||||| || ||||| | ||||||||||||||| || ||| Sbjct 1886 TTCCCGGTCACCTTGGCCACCATGTGGGTCAGGAGGGCGTAGCTGGCGATGTTGAAAGGC 1827 Query 29774 ACCCCGAGCCCC 29785 || || || ||| Sbjct 1826 ACGCCCAGGCCC 1815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405150822485176