Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_030946.1 Length=33477 Score E Sequences producing significant alignments: (Bits) Value seq195504 84.2 5e-12 >seq195504 Length=12304 Score = 84.2 bits (92), Expect = 5e-12 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 24029 CCATTTTCGTGATTGAGCAATCCTTTAACATTCTCAAGGAATAGATATTTAGGTCTGAGA 24088 || ||||||||||| | || ||||| ||||| || | || | ||| ||| | || Sbjct 4427 CCTTTTTCGTGATTCATTAAACCTTTCACATTTTCTAATAAAAATGCTTTTGGTTTATGA 4368 Query 24089 ATAGATGCGAACCTAGCAATTTCAAAGAACAAAGTTCCTCGTGTATCTTCAAAACCTCGT 24148 | |||| | ||| | |||||| | || ||| | || || ||| | ||||||| | Sbjct 4367 AAAGATAATATTCTAACTATTTCATAAAATAAATTACCACGATCATCGTTAAAACCTTTT 4308 Query 24149 CTGTTTCCTGCAATTGAGAAAGCTTGGCACGGAAATCCTCC 24189 || |||||||||||||| |||||||| || ||||| || || Sbjct 4307 CTTTTTCCTGCAATTGAAAAAGCTTGACAAGGAAAACCGCC 4267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106744925200088