Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_031022.1 Length=108050 Score E Sequences producing significant alignments: (Bits) Value seq132376 91.5 1e-13 >seq132376 Length=11941 Score = 91.5 bits (100), Expect = 1e-13 Identities = 199/298 (67%), Gaps = 0/298 (0%) Strand=Plus/Minus Query 68462 TTTTGCTAATATGTGCGTTAATAAAGCATAACTAGCAATATTGAAAGGTAGGCCTAGAAA 68521 || |||||| || |||||||| |||||| ||||||||| ||||| | |||| ||| Sbjct 948 TTGTGCTAACATTATTGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTCCTAAAAA 889 Query 68522 ACAGTCTACAGAACGTTGTGTCCATTTAAGATCTAAGTATCCATCATTACTTACGTAACA 68581 | ||| || |||||| ||| | | ||| | | ||||| | |||||| | Sbjct 888 AATATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGAAACGTAAAA 829 Query 68582 CTGAAAACCATAATGACATGGTGGTAGTGCCATCTTATCCAGTTCAGCAACGTTCCATGC 68641 |||| | ||||||||||||||||||||| || | | ||| ||| || ||||| Sbjct 828 TTGAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGATTTCATGC 769 Query 68642 GGATACTAGGTGTCTACGACCATGTGGATTATTCTTGAGTCCCTCAATGAGTTCTAAAAT 68701 |||| | |||||| || | ||||| || || | || || | || | Sbjct 768 TGATAAAATGTGTCTTCGTGAAAAAGGATTGTTTTTTAAATTTTCTATTAACTCCTGCAA 709 Query 68702 CTGATCTCGTCCGCCAAAGTTGCGCCATTGTTTACCATATACTGGTCCTAGATTACCA 68759 |||||| || ||| || || |||||| ||||||| || ||||||| || |||| Sbjct 708 CTGATCAACACCATTAAAATTACGTCATTGTCTACCATAAACAGGTCCTAAATCACCA 651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344773690870636