Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_031042.1 Length=111325 Score E Sequences producing significant alignments: (Bits) Value seq132376 87.8 1e-12 >seq132376 Length=11941 Score = 87.8 bits (96), Expect = 1e-12 Identities = 191/284 (67%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 14805 TGTTAATAAAGCATAACTAGCAATATTGAAAGGTAGGCCTAGAAAACAGTCTACAGAACG 14864 ||||||||| |||||| ||||||||| ||||| | |||| |||| ||| || ||| Sbjct 933 TGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTCCTAAAAAAATATCTGCACTACG 874 Query 14865 TTGTGTCCATTTAAGATCTAAGTATCCATCATTACTTACGTAACACTGGAAACCATAGT- 14923 ||| ||| | | ||| | | ||||| | |||||| | || || | ||| Sbjct 873 TTGATATAATTGACAAGATAATTTTTTATCATCAGAAACGTAAAATTG--AATTAAAGTA 816 Query 14924 -GACATGGTGGTAATGCCATCTTATCCAATTCAGCAACGTTCCATGCGGATACTAGGTGT 14982 |||||||||||| |||||| || | | ||| ||| || ||||| |||| | |||| Sbjct 815 TGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGATTTCATGCTGATAAAATGTGT 756 Query 14983 CTACGACCATGTGGATTATTCTTGAGACCCTCAATGAGTTCTAGAATCTGATCTCGTCCG 15042 || || | ||||| || || | | || || | || | | |||||| || Sbjct 755 CTTCGTGAAAAAGGATTGTTTTTTAAATTTTCTATTAACTCCTGCAACTGATCAACACCA 696 Query 15043 CCAAAGTTACGCCACTGTTTACCATATACTGGTCCTAGATTACC 15086 ||| ||||| || ||| ||||||| || ||||||| || ||| Sbjct 695 TTAAAATTACGTCATTGTCTACCATAAACAGGTCCTAAATCACC 652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355227569064536