Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_031052.1 Length=57804 Score E Sequences producing significant alignments: (Bits) Value seq539 95.1 4e-15 >seq539 Length=1209 Score = 95.1 bits (104), Expect = 4e-15 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 10497 CTGCCTGTCGGGAAGCTCACCCTCGGCACCGGCCACGCTGGGCCGGGTGGCGACGCGATG 10556 || || ||||| | ||||||| | |||||||| || || ||| || | | ||| Sbjct 883 CTCCCCGTCGGCAGGCTCACCGTGGGCACCGGGCATGCCGGGTCGAAAGCCCCCGCCCAT 824 Query 10557 GCCGCCGCTGCCCACTACGACAACACCGGATCCACCGTCGCGGTCGTCCGGGCAGGGGAA 10616 || ||||| |||||||||||||||||||| || | |||| ||||||| || || ||| Sbjct 823 GCTGCCGCAGCCCACTACGACAACACCGGCACCTGCTTCGCCCTCGTCCGCGCCGGCGAA 764 Query 10617 GACCGGCACGGCATCTGGATGGCTGGC 10643 ||| |||||||||||| || | ||| Sbjct 763 GACGAACACGGCATCTGGGTGTCGGGC 737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184402265292272