Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq112114 107 4e-18 >seq112114 Length=2115 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| || |||||||| ||||||||||| || | | || | || || Sbjct 1963 AGGACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCGTCC 1904 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| |||| | || |||||||| || Sbjct 1903 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATCCCTTCCTTGTCC 1844 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||| | || | | |||| ||| || || || || || || Sbjct 1843 TGGATTTTGGCCTTGACGTTTTCGATGGTGTCGCTCGGCTCAACCTCGAGCGTGATCGTC 1784 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 1783 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1752 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| |||| || || | |||||| Sbjct 1735 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCT 1676 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||||| | || ||| || ||||| || Sbjct 1675 TCGAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 1616 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | |||| ||| || || || || || ||| Sbjct 1615 TGAATCTTGGCCTTCACGTTTTCAATCGTGTCGCTCGGCTCCACCTCGAGCGTGATGGTT 1556 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || ||||||| |||||| Sbjct 1555 TTCCCGGTCAGGGTTTTGACGAAGATCTGCAT 1524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150797372686236