Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20ricinus_20[genbank_20GCA_5F000973045.2_202016-08-24] 204,516 sequences; 514,506,549 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq181532 109 7e-19 >seq181532 Length=1986 Score = 109 bits (120), Expect = 7e-19 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 155877 ATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCA 155936 || || || || |||||||| ||||| ||||||||||| |||| | || | || || Sbjct 12 ATCTGCAGTCGGCCCTTTTCGTCGGGCAATCCAATTTCCATCTGGACCTCGAGACGTCCT 71 Query 155937 GGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATG 155996 |||| | || ||| |||||||| | ||| | | ||||||||||| || | | ||| Sbjct 72 GGTCGTGTTAGTGCCTCGTCAATCATGTCACGCCGATTGGTCATACCGATCACCAGGATG 131 Query 155997 TTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGGCGTCGTGC 156056 ||||| || ||||| ||||| || |||||||| || | ||| || || || | |||||| Sbjct 132 TTGTTCAACGATTCGACACCATCAATTTTAGATAACAGTTGGTTTACCACAGTATCGTGC 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665369855604960