Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq16628 470 1e-127 seq128081 132 4e-26 seq118272 120 3e-22 seq297272 100 3e-16 >seq16628 Length=231947 Score = 470 bits (520), Expect = 1e-127 Identities = 1248/1887 (66%), Gaps = 33/1887 (2%) Strand=Plus/Plus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 |||||||||||||| || ||||| ||| | || |||||||| || | ||||||||| || Sbjct 198615 TTGTCCACTGTAAATTGGATGGCATTTACAGCAGGTTTGGTTCGTAAATAATACATTCCA 198674 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || ||||| || | ||||| | ||||||| || || | ||||||||| | ||| Sbjct 198675 GTTTTCAGTCCAAGTTTCCAACCACAAAAATGCATACTTGTAAGTTTTCCATACGTTGGC 198734 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 | |||| | ||| | || ||||| || || | || ||||| ||||| || | | Sbjct 198735 TGAGCGATGTGTATATTCAGTGATTGACTTTGGTCCACGAAAGCTCCGCGATCTGCCGAC 198794 Query 22286 ATATTTATCAATGTACGCATC---GACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 || | ||| || | || || |||||||| || || |||| | | Sbjct 198795 ATTTC---CAAAATATTCTTCTGAGAAATTTCCCACACAGTGCGATACAACATTTTTAAT 198851 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 ||| ||||| |||| | | | || || || || || || || | |||||| Sbjct 198852 TCTTTAGGTAT--ATTC-AGCTTTTGAACAGAACCATTGTTAGCAATCAGTTCATTTTTT 198908 Query 22403 ATCGTATCGTTCCACAAACCGATGGCG-GTCAAATCTTTGACCAGATGACGGTTCACCAC 22461 | | |||||||| ||||||| | || ||||||||||| | ||||| | || || | Sbjct 198909 AAGTTGTCGTTCCATAAACCGA-GACGCGTCAAATCTTTCAAGAGATGGTGATTTACTAT 198967 Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521 ||||| || || || | ||||| || || | ||| ||| | ||||| | | Sbjct 198968 CTGAAATTCTCCAGAAAGTACGCGCCGAGTATACACATTGCTAGTGTATGGTTCCATTGC 199027 Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581 || || || || || ||||| || || || || || ||||| || || | || || Sbjct 199028 CTCGTTATTACCAAGAATCTGCGCAGTAGATGCTGTTGGCATTGGTGCTACGAGAAGACT 199087 Query 22582 GTTTCTCAAGCCGT-GCTTTGAAATTTTACTCTTGA-GCATCGACCAGTCCCACAGATCG 22639 || | | || ||||| || | || || || | ||| ||||| |||||||| | Sbjct 199088 ATTGCGGATTCCAAAGCTTTTAATTCTTTCTTTTAAAGCA--GACCAATCCCACAGGTTT 199145 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCT 22699 || || || ||||| |||||||||||| || | | || | | || || || Sbjct 199146 GAAGGTGTTACATT---CCACATATCGTACTGAAGGATTCCTTGTGATACTGGACTACCA 199202 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 |||||| |||||||||||| | | | ||||| || ||| | ||||| || || Sbjct 199203 GGGTACGTCTCGTACGGACCAAACTTTTTAGACAGTTCACAACTCTCTTCCAAAGCTCCA 199262 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGC 22819 |||||||| || || ||||||||||| || | ||| || || | | ||| | || Sbjct 199263 TAATATATTGTTTCAAAGATTTTCTTATTAATTTCACAAGCTTCGTCACAGTCGAAAGGA 199322 Query 22820 ATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879 | | | | | ||| ||||| |||| ||| || || || || || || || || | Sbjct 199323 AGTCTTAATAAAATGAAAGCGTCGGCCAAACCTTGGACTCCGATTCCAATAGGGCGATGC 199382 Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939 || || || | ||| || ||||| | ||||| |||| ||||||| || | ||| Sbjct 199383 CGCATGTTTGAAAGTTTCGCTTCGGGAATTGGATAATAATTAACATCGATTATTTTATTC 199442 Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT 22999 |||||||| || || | | | |||| ||||| ||| || | || || Sbjct 199443 AAGTTTCTAGTTACGACTCTAGTTACTTGACGCAATTTTTCAAAATCG-AAGTGTCC-AT 199500 Query 23000 TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059 || ||| || || | || ||||| || | ||| || ||||| |||||||| | Sbjct 199501 GATA-AACGAATCGATTCAAAGCAATCGACGCTAAATTACACACGGCAACCTCGTCAACG 199559 Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119 |||||||||||||| ||||||||||||||||| ||||| ||||| || || | || | Sbjct 199560 GACGTGTACTCTACGATTTCGGTACATAGATTACTACATTTTATTGTACCGACGTTTTTT 199619 Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 || || ||||| |||||| | || ||||| | ||| || ||||| || || || Sbjct 199620 TGATTCGATTTTCTATTGCAGGCGTCTTTGTATAACATATATGGCGTACCAGTTTCCGTT 199679 Query 23180 TGCGACTCGATGATCGCTCGCCACA-TAGTCTGAGCGTGAACACGTCGCACGTACC-TGC 23237 || || ||||| || || | ||| | | || || || |||| | ||| || | | Sbjct 199680 TGTGATTCGATAATTGCACTCCAGAGTTGT-TGTGCACGAACTTGACGCCGATAACGTTT 199738 Query 23238 CTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGG 23296 || | || ||||| ||| | || || || | ||||| ||| || |||| Sbjct 199739 CTCCGTC-TCGTATCGAACGTAAAGTTTTTCGAAGTCTTCGCCGTATACA-TCTTGCAGG 199796 Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356 || || |||||||| | ||| ||| || | ||| || | | |||| Sbjct 199797 TGAGGACTTTCGTGTGGACACATCAACGACCATATTCCATCTTCTTCCACCCTTTTCATG 199856 Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || | ||| || ||||| | | |||| || || || || || | ||| ||||| ||| Sbjct 199857 AATAAATCGGGAATCCACAAACCGTAAAAAAGATCACGTGCCCTACTCTCTTCTTTACCG 199916 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 || || ||||| | ||||||||| || ||||| || || |||||||| || || || | | Sbjct 199917 GTATTTTTTTTTAGATCCAAAAAATCGAACACATCTGCGTGCCACGGTTCCAGATAGATG 199976 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || | ||| |||||||| || ||||| ||||||||||||||||| ||||||||||| ||| Sbjct 199977 GCGATCGCTCCCGGTCTTTTGTTGCCACCCTGATCGACGTAACGTGCCGTGTTGTTATAC 200036 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA---CACTCGAA 23593 |||| |||||| || || | |||||| || | || | || || | ||| Sbjct 200037 ACTCGTAGCATGGGTACAATACCGTTCGATGTACCATTTGTTCCTGCTATGTAACT---T 200093 Query 23594 CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATC 23653 || || |||| |||||| | || | ||||| || || ||||||| || || | Sbjct 200094 CCAGAAGCACGAATGTTGTGTATGTTAATTCCTATTCCACCAGCCGATTTTGAAATGAGT 200153 Query 23654 GCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAG 23713 || || |||||||| || ||||| || || || ||||| || ||||| | | || Sbjct 200154 GCACACTGTTTCAGTGTATCGTATATTCCTTCTATGCTATCGTCTTTCATTTGCAATAAA 200213 Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773 ||||| |||| ||||| ||| || || | || ||| ||||| || || ||| Sbjct 200214 AAACAACTCGACAGTTGCGGTTTAGGAGTCCCAGCGTTGAAAAGTGTGGGAGATGCTTGC 200273 Query 23774 GTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCG 23833 ||||| || | ||||| || |||||||| || || || || || || ||| Sbjct 200274 GTAAACCATTTTTCAGACATGAGGTTGTACGTTTCAATCGCACTGCTAAGATCGTCCCCG 200333 Query 23834 TGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTA 23893 || || || || | |||||||| | ||||| ||| || | ||| || || ||| Sbjct 200334 TGAATGCCAATCGAAACGCGCATAAGCATGTGTTGTGGCCGCTCTACAACTTTCCCATTA 200393 Query 23894 ATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCA 23953 || |||| | || | ||||| || || ||||||||||| |||| ||| || || || Sbjct 200394 ATCTTGAGTAAATGCGCACGTTCCAATGTCTTAAATCCAAAGTAGTTATAATTGAAATCG 200453 Query 23954 CGATCGTGCACTATGGCCGAATTCAAA 23980 ||||||| || |||| ||| || ||| Sbjct 200454 CGATCGTAAACGATGGACGAGTTTAAA 200480 >seq128081 Length=1306280 Score = 132 bits (146), Expect = 4e-26 Identities = 142/185 (77%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 23312 GGACACATGAGACTCCACAT-TGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTAT 23370 ||||||||||| |||||| ||| || | ||| || || | ||| || || || || || Sbjct 763377 GGACACATGAGGGACCACATCTGA-TCCTGTTCCACCCGCCGCATGAACAGGTCTGGGAT 763319 Query 23371 CCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAA 23430 ||| || |||||||| || || || || || |||||| ||||| ||||||||||||| Sbjct 763318 CCAGAGGGCGTAGAAGAGATCCCGTGCCCGGTTCTCCTCCTTGCCCGTGTTCTTTTTCAG 763259 Query 23431 ATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGG 23490 |||| ||||| ||||||||||| ||||| ||||| ||||| | ||||| || || || Sbjct 763258 GTCCAGGAAGTCAAACACGTCCGCGTGCCATGGCTCCAGGTACATCGCAAATGCCCCGGG 763199 Query 23491 TCTCT 23495 |||| Sbjct 763198 CCTCT 763194 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||||||| | |||||||| | | ||||| || || ||||| ||||| || ||| Sbjct 764267 ACCTCGTCTGGCGCGGTGTACTCAATGACCTCGGTGCACAGGTTGCTGCACTTGATGGTG 764208 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 || | || |||||||| || | ||||| | || ||||| |||||||| || ||| Sbjct 764207 CCGAGGTTCTTCTGGTTGGACTTGCTGTTGCAGGCGTCTTTGTACAGCATGTAAGGGGTG 764148 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 |||||||| | ||||||||| | ||| || ||||| Sbjct 764147 CCCGTCTCTATCTGCGACTCCAGGATGGCGTACCACA 764111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 23494 CTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553 ||| ||||| ||||| |||||||| || || ||||||||||| || | ||||| ||||| Sbjct 762614 CTTGTTGCCTCCCTGGTCGACGTAGCGTGCGGTGTTGTTGTAGACGCGCAGCATTGGCAC 762555 Query 23554 GAGACCGTTGGACGCGCCG 23572 ||||||||||||| |||| Sbjct 762554 AAGACCGTTGGACGTGCCG 762536 >seq118272 Length=246527 Score = 120 bits (132), Expect = 3e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || |||||||||||||| ||||| || |||||| |||| ||||| || Sbjct 50779 CATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCCTCGAAGTTGAGCCCAG 50838 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | |||||| ||||| || || || |||||||| ||| | || || |||| Sbjct 50839 TGATACCATCGAAAACGTCAAGGCAAAG-ATCCAAGACAAGGAGGGCATTCCACCTGACC 50897 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||||| || ||||| |||||||| | || ||| || || || || | Sbjct 50898 AGCAGCGTCTCATCTTCGCCGGCAAACAACTCGAGGACGGCCGCACGCTGTCAGACTACA 50957 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 |||| || ||||| || || |||||||| || || |||| Sbjct 50958 ACATCCAGAAAGAGTCCACCCTTCATCTTGTGCTGCGACT 50997 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || ||||| | || || || || Sbjct 50551 CATGCAGATCTTCGTTAAGACTCTGACCGGCAAGACTATCACACTGGAGGTGGAGCCCAG 50610 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| |||||||||||| | || ||||| || Sbjct 50611 TGACACGATCGAGAACGTGAAGGCGAAAATTCAGGACAAGGAAGGTATTCCTCCCGATCA 50670 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || |||||||| ||| | ||||| | || || || || || Sbjct 50671 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAAGATGGTCGCACCCTGTCGGACTACAA 50730 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || ||||| || || || |||||||| || ||||| | || || Sbjct 50731 CATCCAGAAAGAGTCTACCCTCCATCTGGTGCTGCGACTGCGTGGTGG 50778 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| || || || |||||| | || || || || | Sbjct 51236 ATGCAAATCTTCGTGAAGACCCTGACGGGGAAGACCATCACCCTGGAGGTCGAGCCCAGC 51295 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||||||| | || || |||||| Sbjct 51296 GACACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAG 51355 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || ||||||||||| || || |||||| ||| Sbjct 51356 CAGCGTCTCATCTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACCCTGTCCGATTACAAC 51415 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || || || || || || || Sbjct 51416 ATCCAAAAGGAGTCCACCCTCCACCTTGTCCT 51447 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| || || ||||| |||||||| |||| ||||| ||| Sbjct 49867 CATGCAGATTTTTGTCAAGACCCTCACTGGCAAGACGATCACGCTCGAGGTTGAGCCGAG 49926 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||||| || || | ||| ||||||||| || | || || || || Sbjct 49927 CGACACGATCGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCA 49986 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| || | || ||| || | ||| || || Sbjct 49987 GCAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGTACCCTCTCCGACTACAA 50046 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || ||||| || || ||||| ||||| || Sbjct 50047 CATCCAGAAAGAGTCCACCCTTCACCTGGTCCT 50079 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| ||||| |||||||| ||||| || || || |||| || || || Sbjct 51007 CATGCAAATTTTTGTAAAAACTCTGACCGGCAAGACCATTACTCTCGAGGTCGAGCCCAG 51066 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||||| || ||| | || |||||||||||| | || || ||||| Sbjct 51067 TGACACCATCGAAAACGTGAAAGCCAAGATCCAGGACAAGGAAGGGATTCCTCCGGACCA 51126 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || || || ||||| ||| | || ||| | || || || || || Sbjct 51127 ACAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGTACCCTGTCGGACTACAA 51186 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || |||||||| || || || ||||| || Sbjct 51187 CATCCAGAAAGAATCCACCCTCCACCTGGTTCT 51219 Score = 102 bits (112), Expect = 7e-17 Identities = 159/226 (70%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 31179 GAATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCG 31238 || ||||| || |||||| || ||||| || || ||||| || ||||| ||||| ||| Sbjct 49627 GACTTGAA-CAGTCATGCAGATCTTCGTCAAAACCCTGACCGGGAAAACCATCACGCTCG 49685 Query 31239 ACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCG 31298 | || || ||| ||||| | |||| || || | || |||||||| || Sbjct 49686 AGGTGGAGCCGAGCGACACGATTGAAAACGTGAAGGCTAAGATTCAAGACAAGGAGGGGA 49745 Query 31299 TGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTA 31358 | |||||||||||||| ||||| || ||||| ||||| ||| | |||||| || Sbjct 49746 TCCCGCCCGACCAGCAACGTCTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGCACCT 49805 Query 31359 TGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||| || |||||||| || || || || || || ||||| || Sbjct 49806 TGTCCGACTACAACATTCAGAAGGAGTCCACCCTCCACCTGGTCCT 49851 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || || || || || || ||||| | || || || || Sbjct 50095 CATGCAGATCTTCGTCAAAACCCTCACCGGTAAGACAATCACACTGGAGGTGGAGCCCAG 50154 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | ||| ||||||||||||| | || ||||| || Sbjct 50155 CGACACAATCGAGAACGTGAAGGCCAAAATTCAGGACAAGGAAGGCATTCCTCCCGATCA 50214 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || ||||| ||| | ||||| || || ||||| || Sbjct 50215 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTCGAAGATGGCCGAACCCTGTCGGATTACAA 50274 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || ||||| || || ||||| ||||| || Sbjct 50275 TATCCAGAAAGAGTCCACCCTTCACCTGGTCCT 50307 >seq297272 Length=244611 Score = 100 bits (110), Expect = 3e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 57879 CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAA 57938 || |||||||| | || || |||||| || | |||||| || ||| || | || Sbjct 163351 CTATTCAACGCCGTTGAGACGATGCCCTGCATTAAGAGGAAGGCGGACTGGGCACTAAAC 163410 Query 57939 TGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAA 57998 ||||| | | | || ||||| || | |||| | | ||||||| || |||||||| Sbjct 163411 TGGATCAGCAACCGCAGCGCCACATTTGGCGAGCGCATCGTCGCGTTTGCAGCCGTCGAG 163470 Query 57999 GGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATG 58058 || || ||||| ||||| || || | || || ||| ||||||| || || || ||| Sbjct 163471 GGCATCTTCTTCTCGGGATCGTTCGCATCCATCTTCTGGCTGAAGAAGCGGGGACTCATG 163530 Query 58059 CCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||||||| || || ||||||||| | || || ||||||| Sbjct 163531 CCCGGCCTCACCTTCAGCAACGAGCTCATCAGTCGGGACGAGG 163573 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 ||||| || || ||| ||||| ||||| | || |||||||||||||| | ||| Sbjct 160495 GATGAGCCGCTGCTGCGCGAGAACCCCCGGCGCTTCGTCATGTTTCCGATCGTGTATGAG 160554 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||||| ||| ||||||||| ||||| || || || || ||||| || || || || ||| Sbjct 160555 GACATCTGGCGCATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGTGGAGGAGGTGGAC 160614 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 ||| ||||| || | | ||||| ||||| ||| | | || || Sbjct 160615 CTGGGCAAGGACCTCCCCCACTGGGACGGGCTCAAGCCCGAGGAGCGGCACTTCATCTCC 160674 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGT 57739 ||| | | || || |||||||| ||| || || ||||||||||| |||| Sbjct 160675 CACATCCTTGCCTTCTTCGCCGCCAGCGACGGCATCGTTAACGAGAACCTGGT 160727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443707561016640