Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq328384 86.0 1e-11 >seq328384 Length=850358 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 77360 CCAGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGGCTGGCGA 77419 |||| | ||||| ||||||||||||||| ||||| |||||||| ||||| ||| | || Sbjct 402586 CCAGTACGGTGGTGTAGCACAGGTTGTGTGCCATCATGATGGACGGGTACAGGGACGAGA 402527 Query 77420 AGTCGAAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAGACGGTGGCAC 77479 |||| | ||| | ||| || ||||| ||||| | ||||||| ||| ||||| | Sbjct 402526 AGTCCAGCGTCGCTATGGGCACGCTGTAGAAGCCCTTGGCCGGCTCGATGACCGTGGCGC 402467 Query 77480 CC 77481 || Sbjct 402466 CC 402465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 767787802475040