Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq336791 87.8 3e-12 >seq336791 Length=793321 Score = 87.8 bits (96), Expect = 3e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 272872 TGGTGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 272931 ||||||| | | ||||||||||||| |||||| | ||||||| || |||||||||| Sbjct 757143 TGGTGGGGCTGGTAGGACTTGAACCTACGACCACACCGTTATGAGCGGCGTGCTCTAACC 757202 Query 272932 AACTGAGCTATAGGCCCTTTTTATTT 272957 |||||||||| || ||||||| |||| Sbjct 757203 AACTGAGCTACAGCCCCTTTTCATTT 757228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 892798144374080