Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq232272 102 6e-17 >seq232272 Length=187254 Score = 102 bits (112), Expect = 6e-17 Identities = 96/120 (80%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534 || ||| |||| |||||||||| ||| || ||||| || ||||| ||| |||||| | || Sbjct 155112 GACCACCGGGTGCACCACAAGTTCTCGGAGACGACTGCGGACCCCCACGACGCCACCCGG 155053 Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGAC-CAAGGACCCCGACGTGATCTC 108593 || |||| |||||||||||||| ||||| || || | |||| |||| ||||| ||||| Sbjct 155052 GGCTTCTTCTTCTCGCACGTGGGTTGGCTGCTG-TGCCGCAAGCACCCGGACGTCATCTC 154994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380053606930848