Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq120665 91.5 2e-13 >seq120665 Length=1354 Score = 91.5 bits (100), Expect = 2e-13 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGG-AGGCTTTCACCT-CGCTAGTTTTCAAGACTA 31348 ||||| |||||||||||||||||||||| | | || | | | ||| |||||||||||||| Sbjct 892 GCGGATAGGGTGGGATTCGAACCCACGGTACGGTTGCCCGTACGCCAGTTTTCAAGACTA 951 Query 31349 GAGCCTTCAACCACTCGACCACCTCTCCA 31377 | ||||| |||| |||| |||||| |||| Sbjct 952 GTGCCTTAAACCGCTCGGCCACCTATCCA 980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619251423292480