Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq210979 87.8 2e-12 >seq210979 Length=62125 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 153891 AAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACC 153950 ||||| ||| | || || | ||||| | |||||||| ||| |||| ||||| || ||| Sbjct 30976 AAAGCCTACCGGTTGGCGTTGCAGACGCGGGAGCAGCACATCCGGAGGGACAAGGCGACC 30917 Query 153951 AGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTG 153993 || ||||||||||| || ||||| ||||| || || ||||||| Sbjct 30916 AGCAACATCTGCACGGCGCAGGCCCTGCTCGCAAACATGTCTG 30874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576537618801280