Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq336791 86.0 7e-12 >seq336791 Length=793321 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 149445 TATTGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTC 149504 ||||||||| | |||||| ||||||||| |||| ||||||| |||||| ||| |||||| Sbjct 357172 TATTGCGGGGTGGAGCAGCTTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTC 357113 Query 149505 AAATCCACCTCCCGC 149519 ||||||| | ||||| Sbjct 357112 AAATCCAGCCCCCGC 357098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568635087187360