Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq364127 98.7 1e-15 >seq364127 Length=5121 Score = 98.7 bits (108), Expect = 1e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 197073 CTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCC 197132 || |||||| || | ||| |||||||| | ||| | |||||||| ||||| | ||| || Sbjct 5071 CTCGTTGTCCGGGTCGTAGCAGGCGAGGAGGAAGCCACCGTAGGTCCCCGTGCGCTTCCC 5012 Query 197133 CACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTA 197192 ||||| | ||||||||| ||| |||| |||| ||||| | ||| || |||| ||| Sbjct 5011 TTTCCCGTGGTAGCCTCCGAGAACGACCACGTCCACTGTGTCTCCCACACCGTCCAGGTA 4952 Query 197193 ATCTTTCTTCAG 197204 ||||||||||| Sbjct 4951 GTCTTTCTTCAG 4940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 673604022832960