Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq336791 96.9 8e-15
>seq336791
Length=793321
Score = 96.9 bits (106), Expect = 8e-15
Identities = 264/392 (67%), Gaps = 18/392 (5%)
Strand=Plus/Plus
Query 150404 GGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAAT 150463
|| ||||| || || |||||||| || | || ||| | ||||||||||| || |
Sbjct 370355 GGCGAACCCGGAGTCGGTAAAACTGCTATAATAGAGGGACTTGCACAACGCATATTTAGT 370414
Query 150464 GGTGATGTTCCAGATTC---TATGAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCA 150520
||||| || || || |||||| || | | | | |||| |||||| |||
Sbjct 370415 AAGGATGTACCTGAGTCGCTTATGAAC--TGCCGTATTATTGAGCTTGA-TATGGGAGCA 370471
Query 150521 TTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAA 150580
|| | || || |||| ||||| |||||||| || || ||| | | ||||
Sbjct 370472 TTAATAGCGGGGGCTAAATATCGAGGTGAATTTGAGGAGCGTCTTAAAGCAGTGCTTAGC 370531
Query 150581 GAACTAAAAGAAC---GCGATGATGTTATTCTGTTCATCGATGAAATCCATACTATTA-T 150636
||| | |||||| ||| ||| ||||| | || ||||||||| | ||| |||||| |
Sbjct 370532 GAAATCAAAGAATCAAGCGGTGAAATTATTTTATTTATCGATGAATTGCAT-CTATTAGT 370590
Query 150637 GGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCT 150696
||| | || || || |||| || ||||| ||| || |||| || ||
Sbjct 370591 CGGTACGGGAAAAAC---CGACGGTGCTATGGATGCCTCGAATTTGCTAAAGCCGATGCT 370647
Query 150697 ATCTCGCGGTGAAATTCG-TGTCATCGGTGCAACAAC-CTACGATGAATATCGTAAACAC 150754
|||| ||||| | | ||| |||||||| || || ||| ||||||||||||||| |
Sbjct 370648 TGCTCGTGGTGAGCTGCACTGT-ATCGGTGCTACTACTCTA-GATGAATATCGTAAATAT 370705
Query 150755 ATTGAAAAAGATGCAGCACTACAGCGTCGTTT 150786
|| || |||||||||||||| ||||||||
Sbjct 370706 ATCGAGAAAGATGCAGCACTTGCTCGTCGTTT 370737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1142157573639016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |