Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq19933 89.7 7e-13 >seq19933 Length=52972 Score = 89.7 bits (98), Expect = 7e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 48076 CCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTA 48135 ||||| || || || || ||||||||||| ||||| | ||||| |||| |||||||| Sbjct 36364 CCATAGGGTGACCGAGGGTAGAAAGGTGTCGTCTCCTTTTGTGGTATCTCCTGCACCTTT 36423 Query 48136 CCATAAAGTTCACTGGTGGATGCTTGATA 48164 ||||||||||| ||||| || |||||||| Sbjct 36424 CCATAAAGTTCGCTGGTAGACGCTTGATA 36452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 662420714289440