Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq118272 84.2 3e-11 >seq118272 Length=246527 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 155895 AACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATT 155954 |||||||| ||||| || || || |||||||| ||||| || || || | |||| Sbjct 50168 AACGTGAAGGCCAAAATTCAGGACAAGGAAGGCATTCCTCCCGATCAGCAGCGTCTGATC 50227 Query 155955 TATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAG 156014 | |||||| ||||||||||||||| | |||| | || ||||| ||||| |||||| Sbjct 50228 TTTGCCGGCAAGCAGCTCGAAGATGGCCGAACCCTGTCGGATTACAATATCCAGAAAGAG 50287 Query 156015 GCGACGCTTCA 156025 | || ||||| Sbjct 50288 TCCACCCTTCA 50298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728491739387200