Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq165536 82.4 8e-11 >seq165536 Length=484117 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 4929 ATGGGCGAATAGCTCAGC-GGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGA 4987 |||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||| Sbjct 216781 ATGGGCGATTAGCTCAGTTGGTAGAGTATCTCGTTTACACCGAGGAGGTCGGGGGTTCGA 216722 Query 4988 TCCCCTCTTCGCCCA 5002 ||||| ||||||| Sbjct 216721 GTCCCTCATCGCCCA 216707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547083886502240