Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq17663 161 8e-35
>seq17663
Length=183429
Score = 161 bits (178), Expect = 8e-35
Identities = 190/257 (74%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 34314 GAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATC 34373
|||| | ||||| |||||||| || | || | ||| | ||||||||| || ||
Sbjct 79881 GAGCACCGTCTCGGGGTTGTCGCACGAGGCGCAAAGCACGTAGCGGCGGATGAAGCCGTC 79822
Query 34374 AAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTT 34433
|| | |||||| | ||| | | ||||||| |||||||||||| | || ||||| ||
Sbjct 79821 CAGGATGTCCTGCAGCTTGGCCGCCTCGTGGGCCCCGTTGACGATGTAGCGGTCGTTCTT 79762
Query 34434 GTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGC 34493
| || | |||||| || || ||||||||||| ||||||||||| |||||||| ||||
Sbjct 79761 GGCGTCCAGCTGCGTCTGGGCCCCCAGCTCGCAACCGAAGTACTTGGTCGGGTAGGTGGC 79702
Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553
||| || || |||||||| | || |||||| || | || ||||||||||||||
Sbjct 79701 CGGCCGGTTCAGGGCCTTGGCCACCTCCCCCATGTTTACCAGCACCGTCTTGATGCCGTT 79642
Query 34554 GCCCTTTCCTTCGACCT 34570
|||||| || || ||||
Sbjct 79641 GCCCTTGCCCTCCACCT 79625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410982498415556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |