Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq118272 154 1e-32 seq128081 116 4e-21 seq16628 105 6e-18 seq297272 89.7 5e-13 seq244445 87.8 2e-12 >seq118272 Length=246527 Score = 154 bits (170), Expect = 1e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||||||||| || ||||| || || |||| ||||||||| || Sbjct 50983 ATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCTGACAGCGTGCGGCCGTCCTCGAGTTG 50924 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||||| ||| | ||||| ||||||||||| || || ||||| |||||||| |||||| Sbjct 50923 TTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATCTT 50864 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | ||||| | || | || || ||||||| || |||| ||||| ||| |||||||| Sbjct 50863 TGCCTTGACGTTTTCGATGGTATCACTGGGCTCAACTTCGAGGGTGATGGTCTTGCCGGT 50804 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 |||||| ||||| || || |||||| Sbjct 50803 CAGAGTCTTTACAAAGATTTGCATG 50779 Score = 149 bits (164), Expect = 6e-31 Identities = 154/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| || ||| ||| || ||||||||||| Sbjct 49837 GGTGGACTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGTCCGTCTTCAAGCTGCTTGCC 49778 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || ||||||||||| ||||| || |||||||| ||||| ||| Sbjct 49777 GGCGAAGATCAGACGTTGCTGGTCGGGCGGGATCCCCTCCTTGTCTTGAATCTTAGCCTT 49718 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| | |||||||| |||| |||| |||||| |||||||| || Sbjct 49717 CACGTTTTCAATCGTGTCGCTCGGCTCCACCTCGAGCGTGATGGTTTTCCCGGTCAGGGT 49658 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 ||| ||||| ||||||||| || Sbjct 49657 TTTGACGAAGATCTGCATGACT 49636 Score = 143 bits (158), Expect = 3e-29 Identities = 159/207 (77%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||||||||| || ||||| || || ||| ||| | || ||||||| Sbjct 50755 ATGGAGGGTAGACTCTTTCTGGATGTTGTAGTCCGACAGGGTGCGACCA-TCTTCGAGCT 50697 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || || |||||||| |||||||| || ||||||||||| ||| | Sbjct 50696 GCTTGCCAGCAAAGATCAGACGCTGCTGATCGGGAGGAATACCTTCCTTGTCC-TGAATT 50638 Query 133576 TTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || || || | | ||| | |||||| |||||||||| || | |||| || |||||| Sbjct 50637 TTCGCCTTCACGTTCTCGATCGTGTCACTGGGCTCCACCTCCAGTGTGATAGTCTTGCCG 50578 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||||||| || ||||| ||||||||| Sbjct 50577 GTCAGAGTCTTAACGAAGATCTGCATG 50551 Score = 141 bits (156), Expect = 9e-29 Identities = 155/201 (77%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| ||||||||||| || || | | | || ||||||||||||| Sbjct 50293 GGTGGACTCTTTCTGGATATTGTAATCCGACAGGGTTCGGCCA-TCTTCGAGCTGCTTGC 50235 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-C 133580 | || | || || |||||||| |||||||| |||||||||||||| ||| ||| | | Sbjct 50234 CGGCAAAGATCAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTC-CTGAATTTTGGCC 50176 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | ||| | |||||| |||||||||| || | |||| || || ||||| || Sbjct 50175 TTCACGTTCTCGATTGTGTCGCTGGGCTCCACCTCCAGTGTGATTGTCTTACCGGTGAGG 50116 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| ||||| ||||||||| Sbjct 50115 GTTTTGACGAAGATCTGCATG 50095 Score = 136 bits (150), Expect = 4e-27 Identities = 152/201 (76%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 |||||| |||||||| || ||||| || || || |||| |||||| ||||||||| Sbjct 51205 GGTGGATTCTTTCTGGATGTTGTAGTCCGACAGGGT--ACGACCGTCCTCAAGCTGCTTG 51148 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | ||||| ||||| ||||| ||||| || ||||||||||| |||||| Sbjct 51147 CCGGCAAAGATGAGACGCTGTTGGTCCGGAGGAATCCCTTCCTTGTCCTGGATCTTGGCT 51088 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||||| ||||||| || |||| || | ||| |||||||||||| Sbjct 51087 TTCACGTTTTCGATGGTGTCACTGGGCTCGACCTCGAGAGTAATGGTCTTGCCGGTCAGA 51028 Query 133641 GTTTTTACGAAAATCTGCATG 133661 |||||||| ||||| |||||| Sbjct 51027 GTTTTTACAAAAATTTGCATG 51007 Score = 132 bits (146), Expect = 5e-26 Identities = 158/209 (76%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || |||| ||||||||| ||||| || ||||| || || ||| | | | || ||||| Sbjct 50529 AAGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCA-TCTTCGAG 50471 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| ||| | || | |||||||| || || ||||| ||||||||||| ||| Sbjct 50470 TTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGGGGGATCCCTTCCTTGTCCTGGAT 50411 Query 133574 CTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| || | |||| ||||| ||||||| || || | |||| |||||||| Sbjct 50410 -TTTGGCTTTGACATTTTCAATTGTGTCACTGGGCTCGACTTCCAGCGTGATGGTTTTGC 50352 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || ||||| ||||| ||||||||| Sbjct 50351 CGGTGAGGGTTTTGACGAAGATCTGCATG 50323 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| || || || ||||||||| || || | | | || || | |||||| | Sbjct 51433 GGTGGACTCCTTTTGGATGTTGTAATCGGACAGGGTTCGGCCA-TCTTCCAACTGCTTTC 51375 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||||||||| || || |||||||||||||| |||||| || Sbjct 51374 CAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCT 51315 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||| | |||||| ||||||| || || | ||||| ||| || || ||||| | Sbjct 51314 TGACGTTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTCCCCGTCAGGG 51255 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 51254 TCTTCACGAAGATTTGCAT 51236 Score = 120 bits (132), Expect = 3e-22 Identities = 150/204 (74%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||||||||| || ||||| ||| | || ||| ||||||||| |||||| Sbjct 50065 GGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGGGT--ACGGCCGTCCTCGAGTTGCTTG 50008 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || |||||||| || || ||||| || |||||||| ||| || | Sbjct 50007 CCGGCGAAGATCAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCC 49948 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||||||| | ||||| || |||| |||| || ||||| || || Sbjct 49947 TTCACGTTTTCGATCGTGTCGCTCGGCTCAACCTCGAGCGTGATCGTCTTGCCAGTGAGG 49888 Query 133641 GTTTTTACGAAAATCTGCATGGCT 133664 || || || |||||||||||| || Sbjct 49887 GTCTTGACAAAAATCTGCATGCCT 49864 >seq128081 Length=1306280 Score = 116 bits (128), Expect = 4e-21 Identities = 149/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCC 148909 ||| || || ||| ||||||| | || ||||| |||||| |||||||| ||||| ||| Sbjct 764265 CTCGTCTGGCGCGGTGTACTCAATGACCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 764206 Query 148910 CACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCC 148969 | |||||| || ||| |||||||||||| ||||| |||||||||||||| || ||| Sbjct 764205 GAGGTTCTTCTGGTTGGACTTGCTGTTGCAGGCGTCTTTGTACAGCATGTAAGGGGTGCC 764146 Query 148970 AGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCACTTGCTG 149026 || || | ||||| |||| || | ||| ||| | |||||| |||| || | Sbjct 764145 CGTCTCTATCTGCGACTCCAGGATGGCGTACC---ACAGCTGCTGCGCCTGCACCTGGCG 764089 Query 149027 CTCGTAGCGACCCTCCTGCTCGTA 149050 | |||||| |||| |||||| Sbjct 764088 CCGGTAGCGCTTCTCCCCCTCGTA 764065 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 148533 GCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTG 148592 ||||| || ||||||||||| ||||| |||||||| || |||||| || ||| ||||| Sbjct 770520 GCCAGGTCACAGCTCGCCTCCAGCGCCCCGTAGTAGATGGTCTCGAAGATCTGCTTGTTG 770461 Query 148593 AGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGG 148652 ||||| ||| ||||| ||| | |||| |||||| | |||| ||| || | Sbjct 770460 AGCAGACGAGCCTTCTCGCAGTCGAAGGGCAGCCGCAGCAAGATGAACGTGTCCGCCAAA 770401 Query 148653 CCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGA 148693 ||||| || || | || ||||| || || | ||||||| Sbjct 770400 CCCTGCACTCCGATTCCGATGGGGCGATGGCTCTTGTTGGA 770360 >seq16628 Length=231947 Score = 105 bits (116), Expect = 6e-18 Identities = 599/950 (63%), Gaps = 11/950 (1%) Strand=Plus/Plus Query 148810 ATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACT 148869 |||| |||| || || || |||| ||| |||||||| ||| || || |||||| Sbjct 199510 ATCGATTCAAAGCAATCGACGCTAAATTACACACGGCAACCTCGTCAACGGACGTGTACT 199569 Query 148870 CTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCT 148929 ||||||| |||| || ||||| || ||||| || || ||||| |||||||| | Sbjct 199570 CTACGATTTCGGTACATAGATTACTACATTTTATTGTACCGACGTTTTTTTGATTCGATT 199629 Query 148930 TGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCA 148989 | || ||||| ||||| ||||| | ||| || || ||||||||| || | ||| | Sbjct 199630 TTCTATTGCAGGCGTCTTTGTATAACATATATGGCGTACCAGTTTCCGTTTGTGATTCGA 199689 Query 148990 CTA-TGAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCG 149048 | || || | || | || || || ||||| || || || |||| |||| Sbjct 199690 TAATTGCACTCCAG-AGTTGTTGTGCACGAACTTGACGCCGATAACGTTTCTCCGTCTCG 199748 Query 149049 TATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTG 149108 ||| | || || ||||| | |||||||| ||| | || || | | | Sbjct 199749 TATCGAACGTAAAGTTTTTCGAAGTCTTCGCCGTATACATCTTGCAGGTGAGGACTTTCG 199808 Query 149109 TGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGC 149168 || || ||||| | |||||| | || || | | ||| | ||||| || | |||||| Sbjct 199809 TGTGGACACATCAACGACCATATTCCATCTTCTTCCACCCTTTTCATGAATAAATCGGGA 199868 Query 149169 ACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGC 149228 | ||| | |||| | || || || ||| | | ||||| || | || Sbjct 199869 ATCCACAAACCGTAAAAAAGATCACGTGCCCTACTCTCTTCTTTACCGGTATTTTTTTTT 199928 Query 149229 AGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC- 149287 || | | | ||| | || ||||||||||| || | || | |||| ||| || Sbjct 199929 AGATCCAAAAAATCGAACACATCTGCGTGCCACGGTTCCAGATAGATGGCGATCGCTCCC 199988 Query 149288 ---CTTGCGCTTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344 ||| | ||||| ||||| ||||||| || || |||||||| ||||||| | ||| Sbjct 199989 GGTCTTTTG-TTGCCACCCTGATCGACGTAACGTGCCGTGTTGTTATACACTCGTAGCAT 200047 Query 149345 AGGTTCAATGCCACTGGCAGTGCCGTTAG-TAGAGCTAATGCGACTGCCGCGCGCTCGCA 149403 ||| |||| || | | || || || | | ||| ||| ||| || || || | Sbjct 200048 GGGTACAATACCGTTCGATGTACCATTTGTTCCTGCT-ATGTAACTTCCAGAAGCACGAA 200106 Query 149404 CTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCG 149462 ||||| | ||| | || || || || |||| | ||||| ||| || || | Sbjct 200107 TGTTGTGTATGTTAATTCCTATTCCACCAGCCG-ATTTTGAAATGAGTGCACACTGTTTC 200165 Query 149463 AGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCAC 149522 || || ||| || || || ||||| ||| ||||| || | ||| || || Sbjct 200166 AGTGTATCGTATATTCCTTCTATGCTATCGTCTTTCATTTGCAATAAAAAACAACTCGAC 200225 Query 149523 ATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTC 149582 | |||||| | | || || || ||| | ||||| || || ||||| |||| Sbjct 200226 AGTTGCGGTTTAGGAGTCCCAGCGTTGAAAAGTGTGGGAGATGCTTGCGTAAACCATTTT 200285 Query 149583 TGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATG 149642 | ||| | | ||||| || | | | | | | || || || || ||||| || Sbjct 200286 TCAGACATGAGGTTGTACGTTTCAATCGCACTGCTAAGATCGTCCCCGTGAATGCCAATC 200345 Query 149643 GCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAG 149702 | |||||||| ||||| || || || ||||| | ||||| ||| ||||| || Sbjct 200346 GAAACGCGCATAAGCATGTGTTGTGGCCGCTCTACAACTTTCCCATTAATCTTGAGTAAA 200405 Query 149703 TAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752 | | ||| | |||||| | |||||||| || || | || ||||| Sbjct 200406 TGCGCACGTTCCAATGTCTTAAATCCAAAGTAGTTATAATTGAAATCGCG 200455 >seq297272 Length=244611 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 120665 CCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCT 120724 ||||||| || || ||||||||||| || || ||||||||||||| || | ||| Sbjct 163573 CCTCGTCCCGACTGATGAGCTCGTTGCTGAAGGTGAGGCCGGGCATGAGTCCCCGCTTCT 163514 Query 120725 TGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGG 120784 | | |||| |||| || || ||||| ||||| | |||||| ||| ||||| | Sbjct 163513 TCAGCCAGAAGATGGATGCGAACGATCCCGAGAAGAAGATGCCCTCGACGGCTGCAAACG 163454 Query 120785 CGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCATGGCCCACTCGG 120844 |||| ||||||||| | || || || | | || |||||| || | ||||| || | Sbjct 163453 CGACGATGCGCTCGCCAAATGTGGCGCTGCGGTTGCTGATCCAGTTTAGTGCCCAGTCCG 163394 Query 120845 CCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTT 120881 |||| | | ||| |||||| ||| | ||||| Sbjct 163393 CCTTCCTCTTAATGCAGGGCATCGTCTCAACGGCGTT 163357 >seq244445 Length=1296 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 148533 GCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTG 148592 ||||| || ||||||||||| ||||| |||||||| || |||||| || ||| ||||| Sbjct 188 GCCAGGTCACAGCTCGCCTCCAGCGCCCCGTAGTAGATGGTCTCGAAGATCTGCTTGTTG 247 Query 148593 AGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGG 148652 ||||| ||| ||||| ||| | |||| |||||| | |||| ||| || | Sbjct 248 AGCAGACGAGCCTTCTCGCAGTCGAAGGGCAGCCGCAGCAAGATGAACGTGTCCGCCAAA 307 Query 148653 CCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGA 148693 ||||| || || | || ||||| || || | ||||||| Sbjct 308 CCCTGCACTCCGATTCCGATGGGGCGATGGCTCTTGTTGGA 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481188048522080