Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq324894 89.7 6e-13 >seq324894 Length=394762 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 18905 TATGGGGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTC 18964 || |||| ||||||||||||||||||||| ||||||||||||||| | | || |||||| Sbjct 103323 TAAGGGGATGTAGCTCAGTTGGTTAGAGCATCTGCCTGTCACGCAGAAGGCCGCGGGTTC 103264 Query 18965 AAGTCCCATCAATCCCG 18981 |||||| ||| ||||| Sbjct 103263 GAGTCCCGTCACTCCCG 103247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607510701192960