Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq165536 98.7 1e-15 >seq165536 Length=484117 Score = 98.7 bits (108), Expect = 1e-15 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 66401 AATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTAT 66460 |||||| ||||||| ||||||||||||| ||||| || | |||||| | |||||||||| Sbjct 58578 AATGGCGCACCCTAAAGGATTCGAACCTCTGACCCACAGATTAGAAATCTGTTGCTCTAT 58519 Query 66461 CCAGCTGAGCTAAGAGTGC 66479 |||||||||||||| |||| Sbjct 58518 CCAGCTGAGCTAAGGGTGC 58500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519703732631520