Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq324894 86.0 8e-12 >seq324894 Length=394762 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19286 AGGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTGCCGTGGGTTCAA 19345 ||||| ||||||||||||||||||| | ||||||||||||||| |||| |||||| | Sbjct 103321 AGGGGATGTAGCTCAGTTGGTTAGAGCATCTGCCTGTCACGCAGAAGGCCGCGGGTTCGA 103262 Query 19346 GTCCCATCTATCCCGCC 19362 ||||| || ||||||| Sbjct 103261 GTCCCGTCACTCCCGCC 103245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619197274547040