Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq165536 89.7 6e-13 >seq165536 Length=484117 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 13607 TGGGCGATTAACTCAGC-GGTAGAGTGCCTCCTTTACACGGAGTAGGTCGGGGGTTCGAA 13665 |||||||||| ||||| |||||||| ||| ||||||| ||| ||||||||||||||| Sbjct 216780 TGGGCGATTAGCTCAGTTGGTAGAGTATCTCGTTTACACCGAGGAGGTCGGGGGTTCGAG 216721 Query 13666 TCCCTCATCGCCCA 13679 |||||||||||||| Sbjct 216720 TCCCTCATCGCCCA 216707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555078789505440