Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2170 140 2e-28 >seq2170 Length=2407512 Score = 140 bits (154), Expect = 2e-28 Identities = 242/349 (69%), Gaps = 2/349 (1%) Strand=Plus/Plus Query 101747 AGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGC 101806 || ||||| | || |||||||| | || || | || || || |||||||| || || Sbjct 1141093 AGCTTAGTAATGTGTGCAATCATATACGTCAATAATGAGTAACTTGCAATGTTGAAAGGA 1141152 Query 101807 ACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAG 101866 ||||| | || | ||| ||||| |||||||| || || || ||||| | ||||| | Sbjct 1141153 ACTCCAAGACCAACATCTGCTGACCTTTGATAGAGCTGGCAAGAAAGTTCTCCATTAGCA 1141212 Query 101867 ACATAAAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||||||| ||| || ||| |||||||| || || |||| || |||| || | Sbjct 1141213 ACATAAAACTGAACCAA-ACAGTGACAAGGTGGTAAAGCCATCTTTGGAACATCAGCTGG 1141271 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 ||||||||||||||||| || || | ||| | ||||| || || | ||||| | Sbjct 1141272 GTTCCAAGCACACATTAATATTCTGCGATCATTTGGGTTGGTACGAATTTTTTCAATAAT 1141331 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGC 102045 || ||||| || ||||||| ||| ||| || | | | ||||| || Sbjct 1141332 TTGAGCCAATTGATCCACTCCTTTTCCAGAATAGTCATCATTCATAGTCATGTATTCAGC 1141391 Query 102046 TCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 || || |||||||||||||||||||||||||| || | || ||| || Sbjct 1141392 CCCAAAGTGCCTCCACTGAAATCCATACACAGGACCCAAGTCACCTGCA 1141440 Score = 140 bits (154), Expect = 2e-28 Identities = 242/349 (69%), Gaps = 2/349 (1%) Strand=Plus/Plus Query 101747 AGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGC 101806 || ||||| | || |||||||| | || || | || || || |||||||| || || Sbjct 1148787 AGCTTAGTAATGTGTGCAATCATATACGTCAATAATGAGTAACTTGCAATGTTGAAAGGA 1148846 Query 101807 ACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAG 101866 ||||| | || | ||| ||||| |||||||| || || || ||||| | ||||| | Sbjct 1148847 ACTCCAAGACCAACATCTGCTGACCTTTGATAGAGCTGGCAAGAAAGTTCTCCATTAGCA 1148906 Query 101867 ACATAAAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||||||| ||| || ||| |||||||| || || |||| || |||| || | Sbjct 1148907 ACATAAAACTGAACCAA-ACAGTGACAAGGTGGTAAAGCCATCTTTGGAACATCAGCTGG 1148965 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 ||||||||||||||||| || || | ||| | ||||| || || | ||||| | Sbjct 1148966 GTTCCAAGCACACATTAATATTCTGCGATCATTTGGGTTGGTACGAATTTTTTCAATAAT 1149025 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGC 102045 || ||||| || ||||||| ||| ||| || | | | ||||| || Sbjct 1149026 TTGAGCCAATTGATCCACTCCTTTTCCAGAATAGTCATCATTCATAGTCATGTATTCAGC 1149085 Query 102046 TCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 || || |||||||||||||||||||||||||| || | || ||| || Sbjct 1149086 CCCAAAGTGCCTCCACTGAAATCCATACACAGGACCCAAGTCACCTGCA 1149134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361206441653666