Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1460 102 1e-16 seq7337 98.7 1e-15 seq3560 95.1 2e-14 >seq1460 Length=1689650 Score = 102 bits (112), Expect = 1e-16 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127 |||||| ||||| || |||||||| |||||||||||||| | |||| | |||| || Sbjct 729317 TACCAAGTGTAAGGTGGATTCTTTCTGAATATTATAATCTGATAAAGTTTTATTATCCTC 729376 Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCT 146176 ||| || || |||||||| |||||||| |||||||| || ||||| ||| Sbjct 729377 TAACTGCTTACCAGCAAAGATCAATCTCTGCTGATCAGGGGGAATGCCT 729425 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| ||||||||||||||||| | ||| || | ||| |||||||| ||||| | ||| Sbjct 1136609 ATATTGTAATCTGAAAGAGTTCTCCCATCTTCAAGTTGCTTTCCAGCGAAAATAAGCCTT 1136668 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||| || || ||||||||||||||||| || Sbjct 1136669 TGCTGGTCAGGTGGAATTCCTTCTTTATCCTG 1136700 >seq7337 Length=451322 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/185 (69%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| || ||||| || || | || ||| || || ||||| ||||| |||||||||||| Sbjct 238491 ATATTGTAGTCTGAGAGCGTGCGGCCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTT 238432 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTA 146215 |||||||| || |||||||||||||| || || |||| Sbjct 238431 TGCTGATCAGGGGGAATTCCTTCTTTGTCCTGAATTTTGGCCTTTACATTCTCAATAGTA 238372 Query 146216 TCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGC 146275 || || ||| ||||| | ||||| || || || || || ||||||| ||| || ||| Sbjct 238371 TCGGAGGCTTCGACTTCCAAAGTGATGGTCTTCCCAGTCAAAGTTTTAACGAAGATCTGC 238312 Query 146276 ATTTT 146280 ||||| Sbjct 238311 ATTTT 238307 >seq3560 Length=1522174 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || |||||||||||||| ||||||| ||| || | ||||| ||||| || |||||||| Sbjct 965866 ATGTTATAATCTGAAAGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGATCAATCTC 965807 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || || || |||||||| ||||| |||||||| Sbjct 965806 TGTTGGTCGGGAGGAATGCCTTCCTTATCTTG 965775 Score = 89.7 bits (98), Expect = 8e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || |||||||| ||||||||||||| ||| || | ||||| |||||||| |||||||| Sbjct 966171 ATGTTATAATCAGAAAGAGTTCTGCCATCCTCCAGCTGTTTACCAGCAAAGATCAATCTC 966112 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||| || || ||||| ||||| || || || Sbjct 966111 TGCTGGTCAGGTGGAATGCCTTCCTTGTCCTG 966080 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || || || |||||||| || | || ||| |||||||| |||||||||||||||| ||| Sbjct 965570 ATGTTGTAGTCTGAAAGTGTGCGGCCATCTTCTAATTGCTTTCCAGCAAAAATCAGTCTC 965511 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || || || || || ||||| || |||||||| Sbjct 965510 TGTTGGTCGGGCGGGATTCCCTCCTTATCTTG 965479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743431916382720