Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq7337 95.1 8e-15 >seq7337 Length=451322 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| || |||||||| || ||| ||| | || |||||||| ||||| |||||||| Sbjct 238497 TTCTGGATATTGTAGTCTGAGAGCGTGCGGCCATCTTCCAACTGTTTGCCAGCGAAAATC 238438 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGG 34319 | | ||||| || ||| | | || ||||| || ||||| ||||| || Sbjct 238437 AATCTTTGCTGATCAGGGGGAATTCCTTCTTTGTC--CTGAATTTTGGCCTTTACATTCT 238380 Query 34320 CTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAA 34379 | || | ||||| | |||||| |||| |||||||| || || || | |||||| || | Sbjct 238379 CAATAGTATCGGAGGCTTCGACTTCCAAAGTGATGGTCTTCCCAGTCAAAGTTTTAACGA 238320 Query 34380 AGATCTGCAT 34389 |||||||||| Sbjct 238319 AGATCTGCAT 238310 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | || ||||||||| || || ||||||||| Sbjct 240226 CCACCACGAAGCCTAAGAACAAGATGAAGTGTTGATTCTTTCTGAATATTATAGTCGGAC 240167 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||||||||| || || ||||| | ||| ||||| || Sbjct 240166 AAGGTACGTCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGTCTCTGTTGGTCAGGTGGG 240107 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||| || || ||| ||||| | || | || | || | | || || Sbjct 240106 ATACCCTCCTTATCTTGGAT-TTTGGCTTTTACATTTTCAATTGTGTCTGATGGCTCAAC 240048 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || ||||| ||||| ||||| ||||||||||| Sbjct 240047 CTCCAGGGTGATGGTCTTCCCGGTAAGAGTCTTCACGAAGATCTGCAT 240000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323031971984960