Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2170 168 5e-37 >seq2170 Length=2407512 Score = 168 bits (186), Expect = 5e-37 Identities = 247/343 (72%), Gaps = 10/343 (3%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||||||||||||||||||||| ||||| || ||||| |||||||| |||| Sbjct 1141436 GGTGACTTGGGTCCTGTGTATGGATTTCAGTGGAGGCACTTTGGGGCTGAATA-CATGAC 1141378 Query 20278 -ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATT---ACAAAATGTTATTAATTT 20333 ||||| | |||| |||| ||||||| |||||||| |||| ||||| | Sbjct 1141377 TATGAATGATGACTATTCTGGAAAAGGAGTGGATCAATTGGCTCAAA---TTATTGAAAA 1141321 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 |||| || |||||||| || | ||||| | | || || |||||| | ||||| Sbjct 1141320 AATTCGTACCAACCCAAATGATCGCAGAATATTAATGTGTGCTTGGAACCCAGCTGATGT 1141261 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAATG 20452 || |||||||| || || ||||| || | | || ||||| ||||||||| | Sbjct 1141260 TCCAAAGATGGCTTTACCACCTTGTCA-CTGTTTGGTTCAGTTTTATGTTGCTAATGGAG 1141202 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 || | || || || | |||||| | || || ||| | || || || ||||||||||| | Sbjct 1141201 AACTTTCTTGCCAGCTCTATCAAAGGTCAGCAGATGTTGGTCTTGGAGTTCCTTTCAACA 1141142 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 |||||||||| | | | ||||||||||||||||| |||| Sbjct 1141141 TTGCAAGTTACTCATTATTGACGTATATGATTGCACACATTAC 1141099 Score = 168 bits (186), Expect = 5e-37 Identities = 247/343 (72%), Gaps = 10/343 (3%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||||||||||||||||||||| ||||| || ||||| |||||||| |||| Sbjct 1149130 GGTGACTTGGGTCCTGTGTATGGATTTCAGTGGAGGCACTTTGGGGCTGAATA-CATGAC 1149072 Query 20278 -ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATT---ACAAAATGTTATTAATTT 20333 ||||| | |||| |||| ||||||| |||||||| |||| ||||| | Sbjct 1149071 TATGAATGATGACTATTCTGGAAAAGGAGTGGATCAATTGGCTCAAA---TTATTGAAAA 1149015 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 |||| || |||||||| || | ||||| | | || || |||||| | ||||| Sbjct 1149014 AATTCGTACCAACCCAAATGATCGCAGAATATTAATGTGTGCTTGGAACCCAGCTGATGT 1148955 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAATG 20452 || |||||||| || || ||||| || | | || ||||| ||||||||| | Sbjct 1148954 TCCAAAGATGGCTTTACCACCTTGTCA-CTGTTTGGTTCAGTTTTATGTTGCTAATGGAG 1148896 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 || | || || || | |||||| | || || ||| | || || || ||||||||||| | Sbjct 1148895 AACTTTCTTGCCAGCTCTATCAAAGGTCAGCAGATGTTGGTCTTGGAGTTCCTTTCAACA 1148836 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 |||||||||| | | | ||||||||||||||||| |||| Sbjct 1148835 TTGCAAGTTACTCATTATTGACGTATATGATTGCACACATTAC 1148793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399134541850870