Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq615 149 6e-31 seq3560 104 2e-17 >seq615 Length=2534639 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 57634 AGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGT 57693 ||||||| || || |||| ||| | |||||| ||| || |||| | ||||| | Sbjct 1867493 AGGATCTAAGTGACTGGGTTTCATTGAAAGAAGAAGAGCGACATTTCTTATCTCACGTAT 1867434 Query 57694 TGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCAC 57753 | || |||||||| ||||| ||||| || || ||||| ||| |||| ||| |||| | Sbjct 1867433 TAGCTTTTTTCGCGGCATCGGATGGAATCGTCAACGAAAATCTGGTGGAACGATTCAGTC 1867374 Query 57754 AAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813 ||||||| ||| | | || || || || ||||||||||||||| | ||||| ||||| | Sbjct 1867373 AAGAAGTTCAAATTCCAGAAGCAAGGTGTTTTTACGGATTTCAAATAGCCATGGAAAATG 1867314 Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGAC 57860 | ||||| |||||||| || || ||||| || || ||| | || ||| Sbjct 1867313 TTCATTCGGAAATGTACTCTCTTCTCATAGACACTTACATCAAAGAC 1867267 >seq3560 Length=1522174 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||||||||| || ||||| ||||| | || || |||||||| Sbjct 965685 ATGCAAATATTTGTTAAGACTCTGACTGGAAAAACTATCACTTTGGAAGTGGAACCGTCA 965744 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || || ||||||||| | || |||||||| Sbjct 965745 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCCGACCAA 965804 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||||||||||||| ||||||| | || | ||||||||| Sbjct 965805 CAGAGATTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCAGATTATAAC 965864 Query 31373 ATTCAAAAAG 31382 || ||||||| Sbjct 965865 ATCCAAAAAG 965874 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||||| || || ||||| || ||| | || || ||||| || Sbjct 965990 ATGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATCA 966049 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | |||| || || || ||| | ||||||||||||| | || || ||||| Sbjct 966050 GACACTATTGAAAACGTTAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCACCTGACCA 966108 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || ||||| |||||| |||| || | ||| | |||||||| Sbjct 966109 GCAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCAGAACTCTTTCTGATTATAA 966168 Query 31372 CATTCAAAA 31380 ||| ||||| Sbjct 966169 CATCCAAAA 966177 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| || || || ||||| | || || || || || Sbjct 967207 ATGCAAATATTCGTTAAGACACTGACTGGAAAGACCATCACACTGGAAGTGGAGCCATCA 967266 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | || || | ||| |||||| |||||| | || || ||||| Sbjct 967267 GACACTATTGAGAATGTTAAGGCAAAAATCCAGGACAAAGAAGGCATTCCACCAGACCAA 967326 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTAT 31369 ||| | | ||||| |||||||||||| ||||||| | || ||| | |||||| Sbjct 967327 CAGAGATTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGTA-CACTCT--CTGATTAT 967383 Query 31370 AACATTCAAAAAG 31382 |||||||| |||| Sbjct 967384 AACATTCAGAAAG 967396 Score = 82.4 bits (90), Expect = 7e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || ||||| ||||| || || | || || |||||||| Sbjct 971294 ATGCAAATTTTCGTCAAGACACTTACAGGGAAAACTATAACTCTTGAAGTGGAACCGTCA 971353 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | || || | || ||| || || ||| | || || |||||| Sbjct 971354 GACACTATTGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATTCCTCCTGACCAG 971413 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || || || |||||||| || | || | ||||| ||| Sbjct 971414 CAGAGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTCGTACCCTCTCTGATTACAAC 971473 Query 31373 ATTCAAAAAG 31382 |||||||||| Sbjct 971474 ATTCAAAAAG 971483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445709754234720