Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq3560 84.2 2e-11 seq7337 82.4 8e-11 seq1460 82.4 8e-11 >seq3560 Length=1522174 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/192 (70%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 142995 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATA 143052 |||| || ||||||||||| | | ||| ||| || || || |||||||||||| | Sbjct 967962 CTTTCTGGATGTTGTAATC--TGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAA 967905 Query 143053 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 143112 ||||| | ||||| || || || |||||||| ||||| |||||| || | | Sbjct 967904 GATCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCCTTAACATT 967845 Query 143113 TTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 143172 || | ||||| | ||||| ||||| | ||| | ||||| || || | ||| || || Sbjct 967844 CTCAATGGTGTCTGAAGGTTCCACTTCCAGAGTAATTGTCTTTCCAGTGAGTGTCTTGAC 967785 Query 143173 GAATATTTGCAT 143184 || |||||||| Sbjct 967784 AAAGATTTGCAT 967773 >seq7337 Length=451322 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | ||||| ||||| | |||| | ||||||||| || || || ||||||||| Sbjct 238464 TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGCTGATCAGGGGGAATTCCTTCTTTG 238405 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || |||||| |||| | || | || || | || ||| ||||| | ||| | Sbjct 238404 TCCTGAATTTTGGCCTTTACATTCTCAATAGTATCGGAGGCTTCGACTTCCAAAGTGATG 238345 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || ||||| ||||| ||||| || ||||| Sbjct 238344 GTCTTCCCAGTCAAAGTTTTAACGAAGATCTGCAT 238310 >seq1460 Length=1689650 Score = 82.4 bits (90), Expect = 8e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 142995 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGA 143054 |||| || || |||||||| | || ||| ||||| ||||| || ||||| | | Sbjct 1136601 CTTTCTGGATATTGTAATCTGAAAGAGTTCTCCCATCTTCAAGTTGCTTTCCAGCGAAAA 1136660 Query 143055 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTT 143114 | || | |||||| || || || || |||||||| || |||||| || | | || Sbjct 1136661 TAAGCCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTT 1136720 Query 143115 CCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGA 143174 | | ||||||| || || || |||| || | ||| || || || || |||||||||| Sbjct 1136721 CAATGGTGTCCGCTGGCTCAACCTCAAGGGTTATCGTTTTACCCGTTAAGGTTTTTACGA 1136780 Query 143175 ATATTTGCAT 143184 | || ||||| Sbjct 1136781 AAATCTGCAT 1136790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506949971145120