Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2170 127 3e-24 seq615 113 7e-20 >seq2170 Length=2407512 Score = 127 bits (140), Expect = 3e-24 Identities = 231/333 (69%), Gaps = 4/333 (1%) Strand=Plus/Minus Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133 |||| || ||||| ||||| ||||||||||||| || | | || | |||| || Sbjct 1141429 TGGGTCCTGTGTATGGATTTCAGTGGAGGCACTTTGGGGCTGAATACAT-GACTATGAAT 1141371 Query 70134 CA-GACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACC 70192 | |||||||| || | || || ||||||||| ||| ||||| | | ||| Sbjct 1141370 GATGACTATTCTGGAAAAGGAGTGGATCAATTGGCTCAAATTATTGAAAAAATTCGTACC 1141311 Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATG 70252 || |||| ||| | || || ||||||| | ||||| || || ||| | | | ||| Sbjct 1141310 AACCCAAATGATCGCAGAATATTAATGTGTGCTTGGAACCCAGCTGATGTTCCAAAGATG 1141251 Query 70253 GCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTAC-GATGGCAAATTGTCATG 70311 || ||||||| ||||||||||||| ||||||||| | | | |||| || | || || Sbjct 1141250 GCTTTACCACCTTGTCACTGTTTGGTTCAGTTTTA-TGTTGCTAATGGAGAACTTTCTTG 1141192 Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371 | | ||||| ||| || || | || || || || || || ||||||||||| || Sbjct 1141191 CCAGCTCTATCAAAGGTCAGCAGATGTTGGTCTTGGAGTTCCTTTCAACATTGCAAGTTA 1141132 Query 70372 TTCTATGTTGACGCACATGATTGCTCACATTAC 70404 || | |||||| | |||||||| |||||||| Sbjct 1141131 CTCATTATTGACGTATATGATTGCACACATTAC 1141099 Score = 127 bits (140), Expect = 3e-24 Identities = 231/333 (69%), Gaps = 4/333 (1%) Strand=Plus/Minus Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133 |||| || ||||| ||||| ||||||||||||| || | | || | |||| || Sbjct 1149123 TGGGTCCTGTGTATGGATTTCAGTGGAGGCACTTTGGGGCTGAATACAT-GACTATGAAT 1149065 Query 70134 CA-GACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACC 70192 | |||||||| || | || || ||||||||| ||| ||||| | | ||| Sbjct 1149064 GATGACTATTCTGGAAAAGGAGTGGATCAATTGGCTCAAATTATTGAAAAAATTCGTACC 1149005 Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATG 70252 || |||| ||| | || || ||||||| | ||||| || || ||| | | | ||| Sbjct 1149004 AACCCAAATGATCGCAGAATATTAATGTGTGCTTGGAACCCAGCTGATGTTCCAAAGATG 1148945 Query 70253 GCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTAC-GATGGCAAATTGTCATG 70311 || ||||||| ||||||||||||| ||||||||| | | | |||| || | || || Sbjct 1148944 GCTTTACCACCTTGTCACTGTTTGGTTCAGTTTTA-TGTTGCTAATGGAGAACTTTCTTG 1148886 Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371 | | ||||| ||| || || | || || || || || || ||||||||||| || Sbjct 1148885 CCAGCTCTATCAAAGGTCAGCAGATGTTGGTCTTGGAGTTCCTTTCAACATTGCAAGTTA 1148826 Query 70372 TTCTATGTTGACGCACATGATTGCTCACATTAC 70404 || | |||||| | |||||||| |||||||| Sbjct 1148825 CTCATTATTGACGTATATGATTGCACACATTAC 1148793 >seq615 Length=2534639 Score = 113 bits (124), Expect = 7e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 125121 GAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAAC 125180 |||||| | || |||| ||| | || || || || || | || ||||||||||||||| Sbjct 1867458 GAGCGACATTTCTTATCTCACGTATTAGCTTTTTTCGCGGCATCGGATGGAATCGTCAAC 1867399 Query 125181 GACAATCTGTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTA 125239 || |||||| || ||||||| |||||| ||| | |||||||| | ||| ||||| Sbjct 1867398 GAAAATCTGGTGGAACGATTCAGTCAAGAAGTTCAA-ATTCCAGAAGCAAGGTGTTTTTA 1867340 Query 125240 CGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACAT 125299 |||||| ||||| || || || || || ||||||||||||||| || || |||| Sbjct 1867339 CGGATTTCAAATAGCCATGGAAAATGTTCATTCGGAAATGTACTCTCTTCTCATAGACAC 1867280 Query 125300 GTACAT 125305 ||||| Sbjct 1867279 TTACAT 1867274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740965029902160