Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq3560 84.2 1e-11 seq1460 82.4 5e-11 >seq3560 Length=1522174 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/193 (70%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 33180 CTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATA 33239 ||||||| || ||||||||||| | | | || ||||| |||||||| ||| | Sbjct 971483 CTTTTTGAATGTTGTAATCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCTGCAAAGA 971424 Query 33240 TTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTG 33296 | || | |||||||| | || ||||| ||||| || ||| |||| | || Sbjct 971423 TCAATCTCTGCTGGTCAGGAGGAATGCCCTCTTTATCCTGGATCTTGGCCT---TCACGT 971367 Query 33297 TTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTA 33356 | | ||| ||||| |||| || || |||||||| ||||| || ||||| || || | Sbjct 971366 TCTCAATAGTGTCTGACGGTTCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTGA 971307 Query 33357 CGAAAATTTGCAT 33369 ||||||||||||| Sbjct 971306 CGAAAATTTGCAT 971294 >seq1460 Length=1689650 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/198 (71%), Gaps = 14/198 (7%) Strand=Plus/Plus Query 33180 CTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC-ATC--CAA-TTGCTTTCCACTA 33235 |||| || ||||||||||| || | ||||| | ||| ||| |||||||||| Sbjct 1136601 CTTTCTGGATATTGTAATCTGAAA----GAGTTCTCCCATCTTCAAGTTGCTTTCCAGCG 1136656 Query 33236 AATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATC---GCCTGTTTT 33292 || || | | ||||||||| | || || |||||||| || ||| |||| | Sbjct 1136657 AAAATAAGCCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCT---TC 1136713 Query 33293 ACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTT 33352 || ||| ||| ||||| || | ||| || || ||||||||||| ||||| | ||| Sbjct 1136714 ACATTTTCAATGGTGTCCGCTGGCTCAACCTCAAGGGTTATCGTTTTACCCGTTAAGGTT 1136773 Query 33353 TTTACGAAAATTTGCATG 33370 ||||||||||| |||||| Sbjct 1136774 TTTACGAAAATCTGCATG 1136791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318738104053068