Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq615 123 3e-23 >seq615 Length=2534639 Score = 123 bits (136), Expect = 3e-23 Identities = 98/118 (83%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 21517 TTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGC 21576 ||| || ||||| || ||||| ||||| | |||||||||||| | |||||||||||| || Sbjct 1866971 TTCGTTGGAAAACGTCAAACCAGGCATAAGTCCTCTCTTTTTCAGCCAAAATATTGAAGC 1867030 Query 21577 AAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCG 21634 ||||| ||| ||||||||||| || || || || ||||||||||| | ||||||||| Sbjct 1867031 AAATGATCCCGAAAAGAAAATTCCTTCTACTGCTGCAAATGCAACCACACGTTCACCG 1867088 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 |||||||| ||||| | |||||| || ||||| ||||||||||||||||| ||||| ||| Sbjct 1867298 TACATTTCCGAATGAACATTTTCCATGGCTATTTGAAATCCGTAAAAACACCTTGCTTCT 1867357 Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889 | | |||||| || | ||||||| ||| ||||| || || |||||||| Sbjct 1867358 GGAATTTGAACTTCTTGACTGAATCGTTCCACCAGATTTTCGTTGACGATTCCATCCGAT 1867417 Query 21890 GCGGCAAAAAATGCCAATA 21908 || || ||||| || |||| Sbjct 1867418 GCCGCGAAAAAAGCTAATA 1867436 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 21128 TAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTTT 21187 ||||| || |||||||| | || ||| |||||| || | ||| | || || Sbjct 1866423 TAAAAGTCTGCATCTAACGTAAATACAGAATCTTCCTTGGACGCCATCACACCACACTTC 1866482 Query 21188 TGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCC 21247 ||||| || | |||| |||| ||||| || || || ||||| |||| ||||||| ||| Sbjct 1866483 TGATACTCTCCAACTTTTTTCTCGAAGAAGTTCGTTTTTCCCTCCAGTGATATATGCTCC 1866542 Query 21248 ATAAAATCAAATGGATTTTCAGAT 21271 || || ||||| |||||||||||| Sbjct 1866543 ATGAAGTCAAAGGGATTTTCAGAT 1866566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531833208705840