Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2170 109 1e-18 seq2348 93.3 1e-13 seq615 93.3 1e-13 >seq2170 Length=2407512 Score = 109 bits (120), Expect = 1e-18 Identities = 233/348 (67%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 |||||| | || || || || |||||||| ||| | |||||||| || || |||| || Sbjct 1141437 AGGTGACTTGGGTCCTGTGTATGGATTTCAGTGGAGGCACTTTGGGGCTGAATACATGAC 1141378 Query 111548 CATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAAT 111607 ||| | || ||| | | | ||| |||||||| | | ||||| |||| Sbjct 1141377 TATGAATGATGACTATTCTGGAAAAGGAGTGGATCAATTGGCTCAAATTATTGAAAAAAT 1141318 Query 111608 TAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGA 111667 | | |||||||| | ||| | || | ||| |||| ||||||||| || | Sbjct 1141317 TCGTACCAACCCAAATGATCGCAGAATATTAATGTGTGCTTGGAACCCAGCTGATGTTCC 1141258 Query 111668 AAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCT 111727 ||| ||||| | ||||| ||||| | || ||||||||||| | || || Sbjct 1141257 AAAGATGGCTTTACCACCTTGTCACTGTTTGGTTCAGTTTTATGTTGCTAATGGAGAACT 1141198 Query 111728 TTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGC 111787 ||| ||||| | ||||| | || || ||| |||||||||| ||||| || || ||||| Sbjct 1141197 TTCTTGCCAGCTCTATCAAAGGTCAGCAGATGTTGGTCTTGGAGTTCCTTTCAACATTGC 1141138 Query 111788 AAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAA 111835 ||||||| || || | || | | || || || |||| || ||||| Sbjct 1141137 AAGTTACTCATTATTGACGTATATGATTGCACACATTACTAAGCTCAA 1141090 Score = 109 bits (120), Expect = 1e-18 Identities = 233/348 (67%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 |||||| | || || || || |||||||| ||| | |||||||| || || |||| || Sbjct 1149131 AGGTGACTTGGGTCCTGTGTATGGATTTCAGTGGAGGCACTTTGGGGCTGAATACATGAC 1149072 Query 111548 CATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAAT 111607 ||| | || ||| | | | ||| |||||||| | | ||||| |||| Sbjct 1149071 TATGAATGATGACTATTCTGGAAAAGGAGTGGATCAATTGGCTCAAATTATTGAAAAAAT 1149012 Query 111608 TAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGA 111667 | | |||||||| | ||| | || | ||| |||| ||||||||| || | Sbjct 1149011 TCGTACCAACCCAAATGATCGCAGAATATTAATGTGTGCTTGGAACCCAGCTGATGTTCC 1148952 Query 111668 AAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCT 111727 ||| ||||| | ||||| ||||| | || ||||||||||| | || || Sbjct 1148951 AAAGATGGCTTTACCACCTTGTCACTGTTTGGTTCAGTTTTATGTTGCTAATGGAGAACT 1148892 Query 111728 TTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGC 111787 ||| ||||| | ||||| | || || ||| |||||||||| ||||| || || ||||| Sbjct 1148891 TTCTTGCCAGCTCTATCAAAGGTCAGCAGATGTTGGTCTTGGAGTTCCTTTCAACATTGC 1148832 Query 111788 AAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAA 111835 ||||||| || || | || | | || || || |||| || ||||| Sbjct 1148831 AAGTTACTCATTATTGACGTATATGATTGCACACATTACTAAGCTCAA 1148784 >seq2348 Length=1756034 Score = 93.3 bits (102), Expect = 1e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || ||||| || ||||| ||||| ||||| || |||||||| ||| | || || Sbjct 611816 GGTGCATTTGCCATTTATCTTGAGCCATGGCATGCTGACATTTTTGAATTTTTGGACCTG 611875 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| || || |||||||||||| || | || |||||||| ||||| || || ||| || Sbjct 611876 AAGAAGAATACAGGAAAAGAGGAAGTGAGAGCCCGTGATCTCTTCTACGCCCTGTGGATT 611935 Query 363958 TCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| || ||||| || || || Sbjct 611936 CCTGACTTGTTCATGAAACGTGTTGA 611961 Score = 91.5 bits (100), Expect = 4e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 || ||||||||||| |||||||| ||| | || |||||| | |||||| || || || Sbjct 611085 CCTCAGCATATGTTGATGCGTGTAGCTGTGGGGATCCATGGGGAGGATGTGGAGGCAGCC 611144 Query 363514 ATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTAC 363573 |||||||||||||| || || || ||| | || || || ||| | ||||| | | | Sbjct 611145 ATTGAAACATATAATCTCTTATCTGAGCGTTTCTTTACTCATGCCTCTCCAACGCTTTTC 611204 Query 363574 AATGCTGGAACTCGTAATCCACA 363596 ||||||| |||| | |||| || Sbjct 611205 AATGCTGCTACTCCTCATCCTCA 611227 >seq615 Length=2534639 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 22483 TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTT 22542 |||| |||||| | |||||||||| | || ||||| ||||||||||| ||| ||||| Sbjct 1867090 TTCGGTGAACGTGTGGTTGCATTTGCAGCAGTAGAAGGAATTTTCTTTTCGGGATCATTT 1867031 Query 22543 TGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGA 22601 | |||| |||||||| ||||| | | | ||||||| ||| | |||||||| || || Sbjct 1867030 GCTTCAATATTTTGGCTGAAAAAGAGAGGACTTATGCCTGGTTTGACGTTTTCCAACGA 1866972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303183835749812